Ll_transcript_254544

• Id Trinity: FTRINITY_DN59186_c2_g1_i9
• Name Transcript: Ll_transcript_254544
• Sequence: GGAGAACCTCAATGACGAGAATATAAAACCAGCAATATATTGGATACATGTTAAGGACATTGAGAATGATCTTGATGCACAAGCACAGGATTGCTACATA GCAGTGGAGGCTTTATGTGAGGTTCTGAAATCCAGACAACCTCTTATTGTCTATTTTCCAGACAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAT ACCGAAATGAGTTTTTTAATAAAGTTGAAGAGATGTTTGACAAGTTATCTGGCCCCGTAGTGTTGATTTGTGGGCAGAACAAAGTTCAGTCAGGATCAAA GGAGAAAGAACAATTTACAATGATACTTCCAAATTTTGGACGTGCTTCTAAGCTGCCTTTGTCTCTGAAACGATTGACTGACGGATTTAAAGGGGCCAAG AGCTCGGAAGATGATGATGTTCAAAAGCTTTTCTCTAATGTTTTGTGTGTACACCCACCGAAGGATGAAAACCTGCTGGCAACATTTAAGAAACAGCTTG ATGAGGACAGGAAATTTGTGATTTCACGTAGCAATTTGAATGAACTGAGGAAGGTTCTTGAAGAGCATCAGTTATCATGCACAGACCTATTACATGTAAA TACCGATGATGTCATTTTGACAAAGCAAAAAGCTGAAAAGGTTGTAGGCTGGGCAAAAAATCATTATTTGTCATCATGCCTGCTTCCTTCTGTTAAAGGA GAACGATTGTGCCTCCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGGATGAAGGGCCAGGAAACTTTTTCACGGAAACCTTCTCAGAACCTCAAGAGCC TTGCAAAGGACGAGTTTGAGAGCAATTTCATTTCAGCCGTAGTACCTTCAGATGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAA GAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCTTGCAAAGGGATATTACTCTTCGGT CCTCCTGGTACTGGGAAAACTCTACTGGCCAAGGCATTAGCAACAGAAGCTGGTGCGAATTTTATCAGCATAACTGGTTCAACTCTTACTTCAAAGTGGT TTGGAGATGCTGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATTATTTTCGTTGATGAAGTTGACAGTTTGCTTGGTGC TCGAGGTGGTTCTTTTGAACATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTC ATTCTTGGTGCAACAAACCGACCATTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAA CGAAGATTTTAAGAATAGTCCTTGCTCAAGAAAATTTGGTTCCCAATTTTGAGTATGACAAACTTGCTAAGTTGACTGAAGGATATTCTGGCAGTGATTT GAAGAACCTTTGTATTGCTGCTGCATATAGGCCTGTTCAAGAGCTCATAGAGGAAGAGAAAAAGGTAGGAGATAATGGTATGCCTTCTGTATTAAGGCCT CTTAATTTAGATGATTTTGTTGAGTCAAAAGCTAAGGTGGGGCCATCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGT ATGGAGAAGGTGGTAGCAGGACAAAATCACCATTTGGATTTGGGAGCTGATTTTGAAGATTCTTTAACTAACTTATGGCAAAGAGTAATTCAGAAACGTA GTGTAGCCTATAAATTGGTTTAGGTAAAATTTTACTTTATGTATAAACGTGTAATTTCCCCATTTATCTATGTGCTGTTCTCACGCATCATAAGTAATAA AACACCACTTTGGTATCAATTTTCATGCACTCTAGAAGTGTTAATACAATTGTCCAATAGTCGTGATAATTAAAATAAAAGCAAATTGTG
• Tissue: flowers
• Gene name: LI_gene_83631;
• Additional information: details;

Expression of Ll_transcript_254544

FPKM

• FPAB: 6.2
• FPNAB: 9.2
• LF1: 10.7
• LF2: 9.3
• LF3: 7.5
• LF4: 8.9
• UF1: 10.8
• UF2: 9.9
• UF3: 8.3
• UF4: 9.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_254544

• Blastp: Protein MSP1 from Saccharomyces with 43.03% of identity
• Blastx: ATPase family AAA domain-containing protein 1-A from Danio with 46% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR028W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450943.1)
• Pfam: Holliday junction DNA helicase ruvB N-terminus (PF05496.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;