| Id Trinity | FTRINITY_DN59187_c8_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_254453 |
| Sequence | GTCCAACACAAAATATATAGCATATATAACATACATGTTTCATAGCATAATAGATATAACAATTATAATAGTGCATAGCAGAAAAATATAAGATGTTCAA ACATAATGAAATAACATAATAGAAACCGATGTTCATAATAATGCATAAATTACAAATAGATAAACAAAATCCTAGACACAATCTAAGACTCAAGCTCAGA ATTATCTTCATCAACTTCCATACTTCTCACCTTAGAGGAGAGACATTGAAGTTCATATTGGATTTGTTGATTCTGAGTATCGAGAGCATTCATCCGGTTA GTGATATAGCCTCGAAGAGAATGCAACTCGTCCATAATCATCTGATTGGAAGGCATAACAGCAGATGAGGAAGATTAAGCATGAAACTCAGAAGGTTGTA AAGTATGAGGGTTAGGTTTTGTTTGGTCAACAGGGGCAGGTTCTCTATCGGATTGGTGTCTATGTGAAGTTCTGAAAAAAATGCAATTTTCCTTAAATAC CTGCTCAGAGTAATCGGTTACTCACTTCTGAGTAATCGTTTACTCTAATTAAAAAATTTAAAATTTTCAAACAGCATGTTTGAGTAACCGGATACTCAAA AATGGGTAATCGGTTACTGACTCTTGAAAAATCAATTTTTATGCAATTTAAAGCTATGAAAATGATTTTAACCCAAAAACTTGAAATATATAAACATAAA CACATTTAAGTTCATCGAGGATGCCTAATTCAAGCCTAATTTTGTAAAAAAGGTTCTTTTGCCAAAGGCTTAGTGAAAATGTCTGCTAGTTGGTTATAAG TATCAACAAATTCTACAGATACATCTTTCTTTCGAACATGGTCCCTTAGGAAGTGATGTCTTATATCTATGTGTTTGGTTCTTGAATGCATAATTGTATT CTTTGTGAGATTTATAGCACTAGTATTATCACATTTCAGCGGAGTGCAGCCTAAGTCTAAGCCATAATCTCGTAATTGTTGCTTAAGCCACAACACTTGG GTACAACAACTATCTGCTGCTATATATTCAGCATCAGCAGTGCTTAGAGTTACACATGCTTGTTTCTTGCAAGACCAAGAAACTAAAGCGTTGCCTAAAA TGTGACAAGTACCACATGTACTTTTCCTCTCAGATTTCCATCCAGCAAAATCTGAATCTGAATATCTAACCAGTTCACATATACTTCCTTTAGGGTACCA CAGTCCAACTTCAGTTGTACCTTTGAGATATTTCATAATTCTCTTAACAACAACTAGGTGTGATTCTTTAGGTTTAGATTGATAGCGTGCACACAGACAT ACACTAAACATTATATCAGGTCTACTAACAGTTAAGTACATAAGAGATCTGATCATACCTCGATATTTAGATATTTCAATACATTTATCGGGTTCATCTG TATCAATATATGTTCCAGATCCCATAGGAGTAGCTATCGGCTTGCAGTCATCCATATCGATTCTTTTCAACAAGTCTTTGTAGTATTTCGATTGACTCAC GAATATGCCATTATCAAGCTGTTTTATTTGAAGTCCAAGAAAGTAGTTCAACTTTCCCATCATGGACATTTCAAATTCTCCTTGCATCATTTTGCTAAAA TCACTACACAAATTTTCATTAGTAGAACCGAAAATAATATCATCTACATAAATTTGAACTAATAAAGTATGATGATTTATTTTCTTTATAAATAAAGTAG TGTCGACCTTCCCTTTTGTGAAACCTTTTTTTGTTAGAAAGTTCGTTAGACAATCATACCATGCACTTAGATAAAAATAAATATAATAACAATGTTACCT ATACCAATGATTTTCATTTGATGTTCGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83646; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_254453
| Blastp | Copia protein from Sophophora with 34.38% of identity |
|---|---|
| Blastx | Copia protein from Sophophora with 32.18% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000573) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016192204.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |