Ll_transcript_113022

Id TrinityFTRINITY_DN59363_c3_g1_i7
Name TranscriptLl_transcript_113022
SequenceTTGGGTGGATGAGAGAGTTGTGCCCAAGGATCACTTAGAAAGTAATTACAAACTTGCTTATGATGGATTTCTCTCCAAGGTACCAATTCCACCAGTGAAT ATTTATAGCATTGATGATGCCCTAGAAGCTGATGGAGCAGCTGATGTTTATGAAACAACTCTGAGACGTTTGGTTAAGAATGGTGTGATAGCTACATCAG AAAATGGATTTCCAAAATTTGATCTCATGCTACTAGGTATGGGCCAAGATGGGCATGTAGCTTCTCTATTCCCAAGGCATTCTCTTGTGAAAGAGGACAA AAAATGGGTTAGCTTCATCAAGGACTCACCAAAACCACCATCTGATAGAATCACATTAACCTTTCCAGTCATAAATGCTTGTTCAAACATAGCTATGGTG GTGACTGGTGCTGGTAAAAACGGTGCAGTTTATTCTGCCCTAAGGGGTGATGAAAAAAGTGATAAATTACCTGCAGGGTTGGTTTCATCTGAAGGGGAGT TGAAATGGTATTTAGACATAGGTGCTGCTTCAATGCTGTTTAAGGAGTAGATACATGTCATATGCCATTAAAATTAACATCCCTCTATTTATTTACATCT ATGTAATTTGAACCAATTATTTTGCTGGGCTTTTTTTAACTATGTGTATCCTAAAAAATAAGTAAATGATCTAATTATTAATATAATATATGTTTAGTGT GTTAGTTATTTTATTAGTTTTATTTTCTGTGTTGGGTTAGTGGGTGTGTGAGTAGTTTAGCAAGTTACCCCATGTTTAGGGGAGTTATTATGTGTGTAGC TTGAAAACTGATGTAACCTCTCTTTACTTTGCCTATTTTAAGGCTGCCATTAGTGCATAATGAAGACACCAGTTTGCACATTTCTTTGCCTAACATTGGT ATCAGAGCCAGAAACCAAATACACTTTCAATTTTTTTCTCGGGCAATCCTTTTTCTCTTCTTTCTAGCACATAAGTCGTACCCACTTTCCCCACCAACTA AAGTATTTTCAGAGAAGAAAAAAAAACCAGACGCTGCAAGTTTGCAAATTTGCAGCAAATAGATCATTTTGAGAGAATGGTTACTGATAATTTTGTGCAA CCAGTCATTCCACGTTTTGATGGTCACTATGAACACTGGAGTATGTTGATGGAAAATCTTTTAAGGTCCAAGGAGTACTGGCAAGTAGTTGAAGATGGTG TTTTAACACCAGAAGAAGACAGAGAAGTTACTGCTGCACAGAACAGAGAGCATGATGCAATGAAGTTGAAAGATTTGAGAGCAAAAAATTTCTTATTTGA AGTCATTGATCGCTCTATCCTGGAAACCATTCTTTGCAAAGAAACTTCCAAGGATATTTGGGATTCAATGAAAAAGAAATACCAAGGCTCATCTAGAGTC AAACGTGCTCAACTTCAAGCTTCGAGAAGGGACTTTGAAACTTTGCAAATGAAGGAAAGTGAGTCAGTCACTGATTATTGTTCAAGGGTCATGGGAATTG CAAACAGCATGAGAATTCATGGAGAAAAGATGGGAGACACTCTTATTGTTGAAAAAATTCTAAGCTCGCTCACACCAAAATTTGACTATGTGGTGTGTTC AATTGAAGAGTCTAATGACACTGATGAACTCTCTCTTGATGAACTTCAGAGTTCCTTGTTGGTTCATGAACAAAAGATGCATAGAAGTTCAAGAGTGGAG GAACAAGCATTGAAGGCTTCTACCAATACTCATTCCAATAACTTCAGAGGAAGGGGTAGAGGTAGAGGTAGAGGTAGAAGATATGGAGGTCGCGGAAATA GAGATTCCAGCAGGAACTTTAAAGACAATCCTCACCAACAACAAGGAAGAGGTAGAATTTATGAAAAACCCAAGGTAGAGTGTTTCAGATGTCATAAGTT TGGTCACTATGCATATGAGTGTTACACAAAATTGACTAACTACAAAGGGAAAGGAGAACAATCTAACTTTGTAGAGGAGAAGGAAGAAGAAACATTGCTA ATGACATCTCATGAGAAATTCCAATCTGATGTATGGTATATTGATATTGGTTGTAGCAACCACATGTGTGGAAGTAAATCTTCTTTCACTTATTTAGATG AAAACTTTCATTCTAAAGTAAGTTTTGGTGATTGTTCTACTGTAAATGTGATGGGAAAGGAGACATTAAAATTAAAACTAAGAATGGTTTGGTGGAAACC ATCTCTAATGTATTTTATGTTCCTGACTTGAAAAGCAATTTGTTGAGTGCTGGTCAATTGCAGGAAAAAGGTTATATAATAACCATACAGAAAGATGCTT GTGAAATATATGATCCTATCAGGGGAGCCATTGCAGTGGTTGAAATGAGTTCTAACAGGTTGTTTCCTTTGAAGATTCAAAGTGCACAAACCTGTTTGGT GAGTGAAGTGAAGGATCCCTCATGGCTTTGGCATTTTCGCTATGGTCACTTGAATTTCAATGGATTGAAGACACTTCATCAAAAAAATATGGTGGTAATT AATCCATCTCAAATTTGTGAAGAATGTGTTGTTGGCAAACAACATCGTTCATCATTCCCACAAGGAAAATCATGGAGAGCAAAACAAGTTTTGGAGTTGA TTCATTCTGATATTTGTGGACCTATTAATCCTACCTCAAATGGTGGTAAATGGTACTTTATTACATTTATTGATGATTATAGTTGAAAAACATGGGTTTA TTTTCTACAGGAAAAATCTGAGGCTCTATCAGTTTTCCAACAATATAAAGCACTTGTTGAAAAAGGAAGTGGATATGCAATCAAAGTTCTTCGCAGTGAT CGTGGTGGTGAATACAATTCACAAGAATTTGTAAATTTTTGTGACATACATGGAATCAAGAGGCAACTTACAGCAGCTTACACACCACAACAGAATGGCA TTGCAGAAAGGAAGAATCGAACAATCTTGAATATGGTTCGAACAATCTTGCAGATGAGTGGAGTGCCAAGGAATTTTTGGCCAGAAGCTGTAAATTGGAG TGTGCATGTGTTGAATCAAAGTCCAACCATGGCAGTGAAGGATGTAACTCCAGAAGAAGCATGGAGTGGTGTCAAGCCTGAAGTTGGATACTTTCGAGTG TTTGGATGTGTTGCACATGTACACATTCCAGACAAGAAGAGAATAAAATTAGATGATAAGAGTTTTCAGTGTGTGTTGTTGGGTGTGAGTGAAGAATCAA AGGCTTACAGGCTTTATGATCCTGCTTCTAAACGCATTGTTGTAAGCAAAGATGTCATATTTGAGGAGAGTATAAGCTGGGATTGGGGAAGAAATATAGA AGAAGTAAAACTTGATATTTTAGAATGGGGAGATGAAGATGAATCTGATCAAGGTAATGAGAGCAATGAGCATGAAGAAGATGGTGGGGACTGTAACACC GCGAATTTTATGAATTTTGAATTATGAGATTTTATTATTATTTTTAATAAAGGTATTTTCGAAAATGAATTTCTGGGAATTTTTGGTAAAGAATTAGACA AAACTATAGTTGAGTTGAGTTTTAGT BLAST
Tissueflowers
Gene nameLI_gene_85446; 
Additional informationdetails; 

Expression of Ll_transcript_113022

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_113022

BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 22.73% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 40.41% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019465391.1)
Pfamgag-polypeptide of LTR copia-type (PF14223.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;