Ll_transcript_113013

Id TrinityFTRINITY_DN59389_c2_g3_i3
Name TranscriptLl_transcript_113013
SequenceTTTTTCGTTACTGTTCTATTGTATATTGTACCCTTGTGTTCTGGGAAAGAACATTGGCGCCGTCTGTGGCTTACTTGCAACCATGGTGACTACAAGAAAC AGAGCTCTATCTCCCAGCCAAGTCGACCCTGCCCTAAGTACCCTTCCACCACCCAGACAACCATCACACCAAGCCAGTAGAAGCCACCACACTGAACAAG AACCACCACCCCCATCCACCCATCAACTCCTTCAAATGCTGGAACGCCAAGAAAGGCTAATCCAGGAACAAGCTGAACTCATTAAGCAACTACAAAAACC AGAACTGAAAACCACTAACCCTCACGAGCGCCCCATCCAAGAGATCCACCGTGAGGAGTCAGCCGGAGAATCATACATCCCATCCTATCCCACCAACCAA TCTCCAAATGTCCCACACCATTATTGCGGTGCCCGACACCCCTTCACCTCCACTATCATGGCTTGCCCATTACCTTCGCACTTCACCCGCCCCACCAACA TCGACCAGTATGACGGAACAACAGACCCGCAGGACCACCTAGATTCTTTTGAGGCCTCTATGCTCTTCCATGGGGCCACCGATCCGATCATGTGTAGGGC TTTCCCGCTGACTCTAAAAAAGGTAGCCCTACAATGGTTCACACGGCTGACCCCGAACAGCATCAGCACCTGGGCGACCCTGGCTTCTTCTTTCAACACA AGGTTCACAGCCAGCAAGGAACAGCCCAGGTCGTCCTACACACTGTCCGGCATTCGCCAAGGCCCTCAAGAATCCATCAGGGCGTATTTGGATCGGTTTA ATACCGAGGCGATGAAAGTGCGCACTCTAAGCCCAGAAGTGGCCGTCCACGTCCTCGTTATGGGACTACAGGAAGGTCTTTTCCGTACGGAATTGGCCAA ATACACCGACCTCACAATGCAAGACCTCAGATCTAAAGCCCAGCAGTTCATTAATCTCGAAGAAACCCACCACATCCACAACCGTCCAGAACCCCAGCCA CATCACTCCTCTCGAGAAGCCAAAAGACCAAGACCACATGACCACCCACGTGACCTACCTCCCCAACCCAAAAAATCCAAATACTCCACATACACACCCT TGAACGCCAGCCGCTCAAGAATCCTGCAAGAGGTCCTGACAACCCACCTTGTCCAACTCCCTCGCCCACGCCCAGCCAAGCCAGGCCCCCAGGACAGATC CAAGTATTGTGAGTATCACAGCATGTTCGGTCATCTGACGAACGATTGCACTCAGCTTCGAGACACCATCGAAGATCTCATTCAGGAAGGACACCTACAG CGATTTATCGCAGGTTTAGAACAGCGCCGGCGATCACCACAACGTCGTCGGCCTGAATCTACAGGACGGAGGTCCCCTCCCCCAGCTCATCAACGGCGTC CTGTCGCCAGAGACTACCCCGACAGACGCCGCCAAGACAATCAAAGGCAGAGAAGTCCCGTCGATATCAACACAATCTCAGGAGGATTTGCTGCAGGGGG CACCACCAGGTCCGCTCAGAAAAGGTACGTCCGAGAGGTGATGCATGTTTCCGCCAGAAGCTCTCATCATGAACACCACAACACGTCTCCTCCCATCACC TTTGACGACCGTGATTATGAAGGCGTCGTCAGAGGACATGATGACCCTCTCGTCATCACAGCAAAGTTGAACAACAAAAAGGTCAGTCGCCTCTTTGTCG ATCAGGGCAGCTCGGCGGATATCATTTTTCAGGACCTGTTTGAAAAGATGGAACTCCGGGACCGAGATCTCCAACCATATGACGGACAGTTAGTAGGCTT CTCTGGACAAGGCATCACGCCTAGAGGCTACGTAGAGGTCTGGCTGACAATAGGCGACCACCCACTGAGCAGAACAATTCAGACCAGGTTCTTGGTCGTG CATTGCGAATCAGCCTACAACGCCATAATTGGGCGCCCAACTTTGAACAGATTAAGAGCCATCGTGTCCACACCTCACCTGTGTATGAAATTCCTGTCGA GCAGCCTTCAAGTCTGTACAGTCCGAGGAGATCAATACTCCGCCCGAAGCTGCTACCAGATGAGCCTCCGCCCCCATTTCAGCAAGCAACAGGCACCCCC CTCAAAAAAATCTAGGGGCGTGCACATGGTCGAGTTGGACGTCAGAGCAGATGAAGGAGAATTCCGGCCACAACCTGAAGGAGAGAAAATCACACTTCAA TTGGGACGCTCCCCCGGACAGGTAGTCTACCTCGGCCGCACCCTTCCAGCAGAGCAAAGGTTGAAGTTGGAAACCTCCTTAAGGGAAAATCGCGACCTAT TTGCCTGGTCGGCTGCCGATATGCCGGGCATAGATCCTTCAGTCATCTGCCACAAACTGACGACAAATCCGGGGGCAAGGCCGGTGGCACAACGCAGAAG GAAAATGGGGGCGGACAGGATAAAAGAGGTCGCCTCCAAAGTTGCTGAGTTGCTCGAGGCGGGTTTTATCAGAGAAATCACATACACCACCTGGCTTGCA AACGTGGTGATGGTAAAAAAACCCTCCGGGAAGTGGCGGATGTGTGTAGACTACACAGATCTCAACAAGGTATGTCCTAAAGATCCATATCCTCTTCCTA ATATTGACCATTTGGTGGATAATTCTTCAGGTTACCAATACCTCTCCTTCATGGACGCATACTCTGGCTACAATCAAATTCCGATGTACCCGCCAGACCA AGAAAAAACGGCGTTCATTACAGACCAAGCCGCATACTGCTACACGGTAATGCCTTTTGGGTTAAAAAATGCCGGGGCGACTTACCAGCGGATGATGAGC AAAGTATTTGACGGGCAGATTGGGGATCATATGGAGGTTTACATGGATGACATGATCGCCAAAAGCCTTCCCGGCGAAGATCATGTCTCCATCCTGGAAA GCATTTTCAAACAGCTGCGCAAATACAACATGAGACTCAACCCGGAGAAGTGTACATTTGGGGTGGAGGCCGGCAAGTTCCTTGGTTTCCTGCTAACTAG TCGGGGGATTGAAGCAAACCCGACGAAATGCCAGGCGATCATCAATATGAGGAGCCCCCACACAGTTAAAGAAGTGCAACAGCTGAATGGGCGCTTGGCG GCCCTATCCAGATTCCTACCTTCCGCCGCCAAACACTCCCTACCTCTGTTCCAGCTGTTGAGGAAGAGCAAAAAGTTTGAATGGTCCGCTGAATGTGAGG CGGCGTTCCAGACTTTTAAACAGTATTTGGCTGCCCCCCAATTCTCTCCAAGCCAGAACCCGATGAGGTTTTGTTTGTCTACCTAGCTGTATCCGATGAA GCGGTGGCCGCCGTACTGATAAAAGAAACGGCAGACGGGCAGAATCCTGTGTACTTCATAAGCAAAGCCTTACAAGGACCCGAGCTGAGGTACCAGAAGC TTGAAAAGGTGGCGTACGCCTTGTTAGTAGCTACCAGGAGATTGCGCCAATATTTCCAATCCCATGCAACGGTGGTCAGAACTAACCAACCCATCAGGCA AATTTTGCATAAGCCGGAGCTAGCAGGGCGAATGATAGCTTGGTCCGTCGAACTTTCACAGTTCGACATCCGCTTTGAGCCCAGAACCGCCATCAAGAGC CAGGTGTTGTCTGACTTTGTGGCTGAGATGACCGCCCCAGTACATTCTGAGCAGTTGTGGACGATTTATGTAGACGGTTCATCAAATCCAAAGGGAAGTG GGGCTGGAGTTCTGTTGGAAGATGGTCAAGGGGTCACCATTGAACACTCCCTCACGTTCACATTCCAAACCTCCAACAACCAGGCAGAGTATGAGGCCTG CATCGCCGGGCTGCAATTAGCAAAGGAGGTAGGGGCACAGAAAATTTTGATTTGTAGCGACTCTCAGCTGGCCGTTTCACAGATTACAGGTACATACCAG GTCAAAGACCCCCTTCTCGGGAAATACCTGATCAAAGTAAAAGAACTAATGGCCAATTTCGTTGAGGCGACCATTCAGCACGTGCCAAGAGAAAACAACA CCCGGGCGGACATCCTTTCCAAGCTCGCCAGCACCAAGAGCCTGGGAAATAACAGGTCAGTGGTCCAAGGAACGATTTATCAGCCCAGTGTCATGACAGT TGAACAAGTGGTGATCCCGGACAATTGGACAGGGCCTTTCATCCGGTACATCCTCCACGGCAGCCTACCAGCTGACCCGAAGGACAAGCAGAGGTTCCTT AGATGTTGTGCATGGTATACATTGATACAAGGAACCCTGTACAGGCGAGGATTCTCAACTCCCCTCCTCAAATGCCTTGG BLAST
Tissueflowers
Gene nameLI_gene_85661; 
Additional informationdetails; 

Expression of Ll_transcript_113013

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_113013

BlastpTransposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 27.92% of identity
BlastxRetrovirus-related Pol polyprotein from transposon 297 from Sophophora with 31.64% of identity
Eggnog-
KeggLink to kegg annotations (YGR109W-B)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019420725.1)
PfamRetrotransposon gag protein (PF03732.16)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;