Ll_transcript_86389

• Id Trinity: FTRINITY_DN83436_c0_g1_i1
• Name Transcript: Ll_transcript_86389
• Sequence: CTAAAAGAACCTCGTTCGTCACTGATGTTAGTTGGGCTAGTGGCATAAACCCTAAACCCTCCCTAAGACCTCTTCGTCTCTTTCTGTTCGGAACGCTTCA ACATTGTTAATCTCCCCAGACATGAATCGCGTGAAAGCAATTGCAGCTTCCCTCAGAAACCTTGACACGTCACTCACTACTCGAGTTCTCGCAACTCGGT CCCTATATCTCACTCGGAACCAGGTGACTCACTTCTCTCCCCATTCTCCACCACCCCTTTTGCCTCCTCTTCACGATTTTCGTTTTCACCAAAGAATCTA CTTTTCTTCCAAACCCAACTCCATTGTGGAGCTTGTTTTGACCAACGATTGGTCCCAAGATTTAGAAATCGAGTTAGAAAAATGCTCCTCTTCCCTGACC CATGAGACTGTTCTTTACGTTTTGAAGAGATTGGATAAAAACCCTGAAAAAGCTTCCAACTTTTTCAATTGGGTTAGTGAGAAAGAGTGGTTTACACCAA GTTCATCACTGTATAGCTTAATTGTTAGGATCTTAGCATATAAGGAGATGATGAAACAGTTTTGGATTACTCTAAGGGTGATGAAGGAAAAAGGATTTTA TCTTGATGAAGAGACATACCTTACAATTTTAATTGGTTTTAAAAAGGCGAAGCTGAACAGTGATGCCGTTGCCCTGACCCATTTCTATGATCGGATGCTT CAGGATAATGCAATGCAAAGTAATGTCACCAAGGTGGTTGGTATCATTAAAGGGTCAGAATGGAATGATAGGGTTATGAATGAATTGGCACAGGCTAAAC TTCAACTCTGTGATAATTTCGTTATAAGGGTTTTGAGAGAGCTTCGAAGTCAACCTTTGAAGGCTTTTAAGTTCTTTCGTTGGGCTGGGAAGCAATCTGG TTATGAGAACAATACAGTAACTTATAATGCAATAGCAAGAGTTCTTGCAAGGGAAGGATCAGTTCAGGAGTTTTGGAATATTATTGAGGAGATGAGAAGT GTAGGTCATGGATTGGATATCGATACTTACATAAAAATATCAAGGCAACTTCAAAAGAATAAGTTGATGGAGGATGCTGTCAAGCTTTATGAGCTTATGA TGGATAGCTCATATAAGCCATCAATTCAGGATTGCAGTATTCTTTTGAAGAGTATCTCTGTTGGCGATAAGCCAAACCTGGATTTGGTGTTCAGGGTAGC AAAGAAATATGAGTCAACCGGGCATACTCTCACCAAGGCAATCTATGATGGAATCCATAGGTCATTGACAAGTGTTGGGAAATTTGACGAAGCTGAAAAT ATTGTCCAGACTATGAGAAATGCTGGGTTTGAGCCTGATAACATCACATACAGCCAACTGGTTTTTGGACTTTGTAAGATGAAGAGGTTTGAAGAAGCAT GTAAGGTACTAGAGGAGATGGAATCTTGTGGGTGCATCCCTGATATCAAGACTTGGACCATCTTGATCCAAGGGCATTGCGCAGGGAATGAAGTAGATCA GGCATTACTTTGTTTTGCTAAGATGATTGAAAAGGGATGCGATGCAGACGCTGATTTGTTGGAAGTTTTGCTTGATGGTTTTCTTAGTCAAAATAGAATA GATGGCGCATACAAGTTGTTTGTAGAGGTAAGTAGCAAGTGCCGTATTTCTCCATGGCAAGCTACATATAAGAAGCTGATCGAAAAGCTGCTAGGGGTCC AGAAGTTTGAGGAGGCACTTGATCTTCTTAGTTTGATGAAGAAACACAACTACCCTCCTTTCCATGAACCCTTTATGTCTTATATTTCCAAGTTTGGGAC GGTGGAGGATGCTGCAGAATTTCTAAAGGCATTGAGCACAAAAAGTTACCCTGCCGAAGCAGTTTACTTCAAGGTTTTTGAGTCCTTATTCAAAGAAGGT AGACACTCCGAGGCCAAAGATCTATTGTACAAGTGTCCTCACCATATACGTAATCATAAAAAAATCTCTGAATTGTTTGGTTAACCAGAGTCACTTGTCT GCTACGTGATTCCGAGATTTTCCCCATTATGTATCTTATCTTTCTTCAAATGGTTGATATTATCAACTTTGGCCAAGCTGTTAGGTAGGTTTGCTCATTG CTAGTTGAAATCTCTTGGGATAAAAAGATTTGATGTCAGGTAACCTTCATGGTTGAAATTGTAAGAGTTGTTCATGTATGACCAGTAATGTTATCATTAC TAGCAATTCTTTTAAAATATTTGTCAGTTCCACCTTTTATGTTTTTTAGTGATGGATTTCCAGATTTTATGTTTTCCAAATAGCGATCCATATACATGC
• Tissue: flowers
• Gene name: LI_gene_110249;
• Additional information: details;

Expression of Ll_transcript_86389

FPKM

• FPAB: 1.3
• FPNAB: 4.5
• LF1: 2.2
• LF2: 1.6
• LF3: 2.6
• LF4: 5.2
• UF1: 2.2
• UF2: 2.3
• UF3: 3
• UF4: 3.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_86389

• Blastp: Pentatricopeptide repeat-containing protein At3g48250, chloroplastic from Arabidopsis with 54.7% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g48250, chloroplastic from Arabidopsis with 54.97% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G48250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464696.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;