Ll_transcript_451609

• Id Trinity: TRINITY_DN12000_c0_g1_i1
• Name Transcript: Ll_transcript_451609
• Sequence: ATGGGATAACAAGCTTATATAGAGAGAAAATAAAACACGATATATAAAAGTTTGATGAGTTGATTTATTTGTACAAAAGATTATATATTGAAAAATAAAT GAACACATCATGTGTTTTGCATTATTTTTCTCTGTCTATGTTTTTTTATAAAGTAAAAGTGTGCAAAAAATAATGCGCATAATTATTATTTGCTTTTTGA AAAGTAATTTTGGTAGAGAAAAGTTTGAGTTTTTATTGGTTAAATGAATAAGAAGGGTATTTATTATCTTATTTATTTGTAGTGATTGGAGTGTTACTGT GTTAGTTAATTAGTTAGTAAGAAGAAAAGTGGAATAACAAATATCAAATGAGACTGCAGCATGGTTCTCTTATTGCAAAATACGCACGCAGTGGCGATAT CCAAAATGCTCGTAAGATGTTCGACGAAATGCCTCTCTCACAAAAAAACACTTCTTCATGGAACGCAATCGTTTCAGCTTATTTCCAATCCAACAACCCT CACGAAGCGACCCTTCTCTTCAGCAGAACACCCAACAAGAACACAGTTTCATGGAACAACTTGATATCTGGTTACATTAAAAACAAAATGCTCATTCAAG CAAGGAATGTGTTCGACTCAATGCCTGGCCGAAACGTTGTTTCCTGGACCTCAATGGTCCGTGGGTACATTCAAAATGGGATGATCTCAGAAGCAGAAGC ACTTTTCTGGCGTATGCCGGATAAGAATGTTGTTTCATGGACAGTCATGCTTGGTGGCTTACTTCAAGAGGGTCGGTTTGATGATGCGCGGAAATTGTTT GATAAAATGCCTGTGAAGGATGTTGTGGCCGTAACAAGCATGATTGGTGGGTATTGTCAGGAGGGTCGTTTGGGTGAAGCTCGTGCTCTATTTGATGAGA TGCCACGCAGGAATGTAATTACTTGGACGACAATGATTTATGGTTACGCACGTAACGGGTGTGTGGATGTTGCCAGGAAGCTTTTTGAAGTGATGCCGGA GAAGAATGAGGTGTCTTGGACGGCAATGCTTATGGGTTATACTCAGAGTGGAAGGATGAGTGAGGCTTCTGAGCTTTTTGATGCAATGCCGGTGGAATGG ACTGTTTGTTGCAATGAAATGATTATGGGATTTGGGAGTGTTGGGGAGGTTGGTAAAGCAAGGGATGTGTTTGAACGGACGAGGGAGAGGGATGATGGAA CATGGAGTGCGATGATTAAGGTGTATGAAAGGAAAGGGTGTGAGTTGGAAGCACTTGGTATGTTTGCTAGGATGCAAAGAGAACGTGTTGCACTGAATTT CCCTTCGTTGATTAGTGTTCTTTCTGTATGTGCTAGCCTAGCCACTCTTGATCATGGCCGACAGGTTCATGCTCAGTTGGTGAGATCTGAATTTGATCAA GATTTATATGTTGCTTCGGTGTTGATTACAATGTATGTTAAATGTGGTGATCTTGCAAAAGCAAAACTTATTTTTAACTTGTTTCCCTTCAAGGATGTTG TTATGTGGAACTCTATGATCACAGGTTATTCCCAGCACGGTTTGGGAGGCGAAGCATTAAATGTTTTCCATGATATGTGCTCCTGTGGAGTTCAGCCTGA TGATGTTACCTTCATTGGAGTTCTCACGGCATGTAGCTATAGCGGAAAGGTGAAAGAAGGGCTTGAGTTTTTCGAATTAATGAAATCCAAATATCAAGTG GAGCCAAGAGTAGAACACTATGCTTGCTTGGTTGATCTGCTAGGCCGAGCTGGCCGGGTAAATGAAGCAATGGAACTAGTAGAAAAGATGCCAATGGAAG CAGATGCTATTGTTTGGGGTGCATTATTAGGTGCTTGTAAAACTCATATGAAGCTGGATTTGGCTGAAATTGCAGTGAAGAAACTTGCACAGCTAGAGCC AAAAAATGCTGGGCCGTCTGTCTTGCTCTCAAACTTGTATGCAGCAAAAGGAAGATGGGGGGATGTTGAAGTCCTTAGGGAGAATATAAAAGCAAGGTGT GTTATCAAATTGCCAGGCTGTAGTTGGATTGAGGTAGAGAAGAAGGTACATCGGTTCACCGGCGGAGACAGCAAGGGACACCCGGAGCAGGCAATTATCA TGAAAATGTTGGAGAGGTTAGGTGGATTGTTAAGGGAAGCAGGGTACTGTCCTGATGGGAGTTTTGTGCTTCATGATGTGGATGAGGAAGAGAAGACACA TAGCTTGGGTTATCACAGTGAAAAGCTAGCTGTTGCCTATGGACTAATAAAAGTGCCTGAAGGAATGGCAATTAGAGTTATGAAAAATTTGAGGGTTTGT GGGGATTGCCATTCAGCAATCAAATTGATAGCCAAAGTCACTGGAAGGCACATCATTTTGAGGGATACTAATAGATTTCATCATTTTAAGGATGGTTCCT GTTCTTGTAATGACTATTGGTGATTACACCAACAAACCTATCAAATTAATTAAGAATCAAATCTACATTTTAC
• Tissue: pods
• Gene name: LI_gene_119611;
• Additional information: details;

Expression of Ll_transcript_451609

FPKM

• PAB: 0.1
• PNAB: 1.6
• PS1: 2.1
• PS2: 1
• PS3: 2.2
• PW1: 1.4
• PW2: 1.3
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451609

• Blastp: Pentatricopeptide repeat-containing protein At1g56690, mitochondrial from Arabidopsis with 64.86% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g56690, mitochondrial from Arabidopsis with 64.86% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G56690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450411.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;