Ll_transcript_389829

• Id Trinity: TRINITY_DN12512_c0_g1_i1
• Name Transcript: Ll_transcript_389829
• Sequence: ATTAAATTCTATAATATTCGCCACCATTCGAAGTTTCTAGAGGGTTCGAAATGAGAAAAGAACCTTTCTTTGTTCTTGTTGCTGAGCTTGTGAGCAAGCA CTCACACTCACTCAATCAAAATTGAACAATTCAACTATCAATGGCTCTCTCTGCTGCCACTGGCAAAGGCACATTCGTATCAGTATCTCGTGCCTTAGTT TTCACCTCTAAAACTTCACCTTTATTTCTCTCTTCCCTCCAAATCCAATGCAGATATTTCACTTCACCTCCACCTTTTCCCATTTCAACAAAACCCTTCT CTCCGAAATACCCATCTCCCAAAGTTTCAATTTTTGATCTCATTAAACGCCATTTCAGCTCTCAAAATAACCCCATTAGAAAAAGCATCGATACAAAGGT CAATTTCTCACTCTCTGATTCTGATTCCGATTCTGATGATGAAAAAGAAGCTGCACCCACCAAACAAATCGACAAGAGCAAGAACCTTCCACCACCTTAC GACCCATTTAACAAAAAGCCAGCAATAGAAGAACCCAAAGACCCAAAAGACTTGCAAGAGATTTTCCACAACATGAGAACCGGTGATGGGTTATTAAACC ATGCAGCCAAGATGTTCGACCATTTGTCCAAACAAGGTCTAACTCATGAAGCTTTAGAACTCTTTGCACAAATCAAAGACAAGGGTCAAATGCCCGACGT AGTGTCCCACACTGCCATCATTGAAGCCTATGCCAATGCTTCTCAGCCTAAAGAGGCTCTTAAGGTTTACATGCGCATGCTTGCTTCTGGGGTCACCCCC AATGCTTATACCTATGCTGTTCTTGTCAAAGGGCTTTGTGTTAGTGCCAAGTTTTTGAAGGATGCTAAGAAGTATGTTTTGGAAATGATGGATAAAGGGA TGACGCCTAATGCGGCGACTTACACGGCGGTGTTTGAGGCTTTGGCTAAGGAGGAGAAGGTTGATGAGGCTGCTGAGTTGTTGGAGCAGATGAAGGCTAA GGGGTTCGTTCCTGATGAGAAGGCCGTGAAGGAGGTTCTTAGCAATAAACGTGGCCCTATTTGTAGAACTGTTATAAACATTCTTTTTGGCAAGTAGCTT AGATGCACTACTTAGTACTTAGTGTAGTGTGCGTGTTTGGAACATGTAATCTATGACTTTCTTTGGCTGCATAATATCTGGTTTTCATTGGTTATATGCG TTTCCTTTTGTTTCACATGCACGCTAATCGTTTAGTTCTAGGTATACATTTCCCTTATTCTCTCGTTTATCCATTTTATATACACGG
• Tissue: pods
• Gene name: LI_gene_119811;
• Additional information: details;

Expression of Ll_transcript_389829

FPKM

• PAB: 1.8
• PNAB: 6
• PS1: 2.4
• PS2: 4.3
• PS3: 3
• PW1: 1.8
• PW2: 1.8
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_389829

• Blastp: Pentatricopeptide repeat-containing protein At4g38150 from Arabidopsis with 37.5% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g38150 from Arabidopsis with 37.5% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G38150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427578.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;