Id Trinity | TRINITY_DN12520_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_389840 |
Sequence | TTTCATTCATCACCATGGATTATGCAACATGGTACCATTGTTGTGTCCACAAACGACAACAACTCCAAAACCTAAAACTCGCAGACTCCTTCCAAATTGA AGTTAATTTCTTCATTCGATATTACCTCCCAATCGATGATCCCAACTCACATCCACTTATCATAGACACAGTACCCTTCATTCAAACCTCTTTCACCCTA CTCTGCAAACATATCTTCGAAATTAACCATAAAGATTTCCTACGAAGAAACTTAGCGAACTCATTATATGCAACCCTCTTGACCTATGCTTCTCCACAAG ACATTGAGAACATATCATGTGAGATAATAGCCCAGCTCCGAGAACTTTACATTAGTCATGCTTCAAATCCTGGATCCACAAAATCATCAGATTTAAGAGG CGAGTCGTTTGATTTTGATGTAAATGTTAGCATTGACATCCCCATTAACACTAGTGATGAAGAGTTGGATGTACAAGAACAATTGTCCATGCAAGAAGAT GTGAAGATGGTTCCAGCATCTGACAAAGACGTGCAATCTTTGAAAACATACAAGCTTCCACAGCAATGCCAAATATGTTTGGAGAAGTTCTATGGGGAGA AGGAAGATGATGATGACGTAGAGATCACAACAATGCCATGTGGTCATGTCTTTCACAGTCAATGTATCATACAATGGCTGCAAACCAGTCACATGTGTCC TTTATGTCGTTGCCCTTTATCTACAGACAACAAAAGAAAAAGATAAGTGTATTTTAATTTAATTAGACTTTACAACATTTTATGATATTATCATTAGTTT TTTATTGTCAATTACTAGTATATTTGTATTTTGTGGTGGATGAAACTCATTATTAATTTCCTTTATCCTAATTATAATATAACTTCCATTTTTGAAAAAA A BLAST |
Tissue | pods |
Gene name | LI_gene_119815; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389840
Blastp | E3 ubiquitin-protein ligase RING1-like from Arabidopsis with 34.57% of identity |
---|---|
Blastx | E3 ubiquitin-protein ligase RING1-like from Arabidopsis with 34.57% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | Link to kegg annotations (AT3G19950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447189.1) |
Pfam | Anaphase-promoting complex subunit 11 RING-H2 finger (PF12861.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |