Ll_transcript_351528

• Id Trinity: TRINITY_DN14368_c0_g1_i1
• Name Transcript: Ll_transcript_351528
• Sequence: CTTTATTCTCCTACCTCCCCAGGAGGTCTCTAGCTGAATTTTTTCTTTTGTAAAAAATAACTAAAACATAAAAATACATATATTCCTAGGAATTGAGGTT CAATGGCCACTGCAAAGAGAGTTGAAATTGTTATTTTGTGCTTTGCACTGGCCTGTTATTGTGTGAATGCTGGTCCAAGAATAAGGCCTATTGCTGGGCC TGATATCTACAAAGGTCAGAATATAGCTAAGGATTCCCTTGCTCCTGGAGAGAAAATTGTTAATGTCATGAACTTTGGAGCCAAACCTGATGGCGAGTTT GATTGCACTCAGGCTTTCATGGACGCATGGAGAGCAGCATGCAAGTCCCCAGGGCAAAATAGGCTTCTAATCCCACCGGGAAGGTTCTTGGTTTCATCAA TGTTTTTTGCTGGGCCATGCATGGCACCAAAGCCAATAACAATCCAAGTTGTAGGAACAGTTCTAGCTACAACTGATATAAGTGAGTATGAAAATGGAGA ATGGCTCATGTTTGAGGACATTGCTGGCCTTAAACTTATTGGTGGAGGTACTTTTGATGGTCAGGGTCAAGAATCTTGGTCACAAACTGAGGACTGTGAA AAATCCGGTTCTACATGTGTCAGAAACCCTAGTAGCCTTTATTTCAACAAGGTAACTAATGGAGTTATACAAAACATCAAAT
• Tissue: pods
• Gene name: LI_gene_120417;
• Additional information: details;

Expression of Ll_transcript_351528

FPKM

• PAB: 0.3
• PNAB: 0.8
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351528

• Blastp: Exopolygalacturonase from Zea with 36.67% of identity
• Blastx: Polygalacturonase from Actinidia with 37.5% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424932.1)
• Pfam: Pectate lyase superfamily protein (PF12708.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;