Id Trinity | TRINITY_DN18938_c0_g1_i1 |
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Name Transcript | Ll_transcript_448718 |
Sequence | GGACAAAGAAGACATCAAAGAAGAAAAAACCGAGGACGATGAAAAGAAAGACGGAGAAGAAGAGAAAGCCAAAAGAAAGTTTATGTTCAACATAGCCGAC GGCGGGTTCACAGAGTTGCACACATTGTGGCAAAATGAAGAGAAAGCTGCAGTCCCCGGTCGGGAGTACGAAATCTGGCACCGACGACATGATTACTGGC TTCTTGGAGGGATCGTCACTCACGGCTATGGCCGATGGCAGGATATCCAGAACGACATCCGATTTGCAATTATCAACGAACCTTTCAAAATGGATGTCGG AAAAGGGAACTTTTTGGAAATCAAGAATAAATTTTTGGCCAGGAGGTTCAAGCTGTTG BLAST |
Tissue | pods |
Gene name | LI_gene_121974; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448718
Blastp | Chromodomain-helicase-DNA-binding protein Mi-2 homolog from Sophophora with 95.96% of identity |
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Blastx | Chromodomain-helicase-DNA-binding protein Mi-2 homolog from Sophophora with 97.85% of identity |
Eggnog | helicase(COG0553) |
Kegg | Link to kegg annotations (Dmel_CG8103) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014632790.1) |
Pfam | CHDCT2 (NUC038) domain (PF08074.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |