| Id Trinity | TRINITY_DN35858_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_408077 |
| Sequence | CGTTAGAACCGTTAAGAAGGTTGTGTAACATTCCTCATCATATCTTCGATAATTAAAGATTCGTTTGCTAGTTGGGTTTTGGAAGATGGTTCTGACGTCT CCAAAGCTCAACTCACAAATGGACCGTAAAGCATCAATTCAGTATCTGAGATTGATATTATTCGTCAATTGCGTCTGAGATTACATGAAACAAAAATACA ATTTTTGTCTCTGATTTTGTCAAGCTGTCTGTCAATTTGCCCATGGCATAGAAATTATAAATTTCGTCTCTGATTTTTTTTACACTATAGTTCTCACGCA CTCCTAATTATTGAATGAAATTCATGTAGAATCCAACAAATAGGGAGTGGATCAGTGCGGTGCGATTTTAGTGAGCTCTATATAAAGTTCATCCAATAAT AGAGAGTGTGTTGAAAAGTTTTAAAATAATGTTTTTTTACTATTTCTCTTTGAATAGTTGTAATGCGTACTTTATTTTGCAGGTTGCCCTTGTTGTCATG ACTGGTGACCATGGTCTTTGTGGCGGTTTCAACAATGCAGTGACGAAAAAAGCGGAGATCAGAATCAGAGAATTGAAGAGTCTTGGTTTGGATTGTGTTG TTATTAGTGTTGGAAAAAAGGGTAATTCATTTTTCAAGAGTAGGAATTTTGTTCATGTTGATAGGTTTATTGAAGGTGGGAGTTTTCCAACTACAAAGGA AGCTCAAGCTATAGCCGATGATGTTTTTGCACTGTTTGTTAGTGAGGATGTTGATAAGGTTGAGCTTGTGTACACTAAGTTTGTGTCTTTGGTGAAGTTT GATCCGGTGATTCATACATTGTTGCCATTGTCAACAAAAGGAGAGGTTCGTGATGTGAATGGGAATTGTGTTGATGCGATGGAGGATGAGTTTTTCAGGT TGACTACTAAGGAAGGAAAGTTGGCTTTGGAGAGGGATGTCGTGGATAGGAAGAGAGGTGAATGCTTGCCACTTATGCAATTTGAGCAAGATCCGGTTCA GATTCTTGATGCTATGATGCCTCTTTATCTGAACAGTCAGATTTTGAGAGGCTTGCAAGAATCACTGGCTAGTGAGCTTGCTGCAAGAATGAATGCCATG TCTAATGCCACTGAAAATGCAATTGAGTTGAAGAAGAATCTCTCAATGGCCTACAACCGGCAACGACAGGCAAAGATCACAGGGGAGCTGTTAGAGATTG TGGCTGGAGCTGAGGCACTAACACCAATTGATTGACAAATATAATTTCTTTCTCCTATATAGGTTGTTTTTGAGAATACTGAAATGTGTTAATTGATATA GAACATGGGATTCTAAGGTTTCCCAGCTTTTACTAATAGCTAATAGCTTTCTAAATTCTAAGGTTTAGCCAAGTAAAAAAGGATTGTAGTAGAAAGTTTT GGCCTTTAATTCATTTCTTTGTTATTCTATCAAAGTGCAGTTTAATCCTTTTGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_127556; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408077
| Blastp | ATP synthase gamma chain 2, chloroplastic from Arabidopsis with 78.4% of identity |
|---|---|
| Blastx | ATP synthase gamma chain 2, chloroplastic from Arabidopsis with 79.03% of identity |
| Eggnog | Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (By similarity)(COG0224) |
| Kegg | Link to kegg annotations (AT1G15700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417958.1) |
| Pfam | ATP synthase (PF00231.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |