Id Trinity | TRINITY_DN35945_c0_g2_i1 |
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Name Transcript | Ll_transcript_324981 |
Sequence | ATTGATACTACACTATATAATATCATCTTCTTACATATACATATGAGCTTAATATTTATAGAGTAACCTTCTCTGATCTTACCAAAGAAATCAAGTCCTT TTCTTCTTTCTCAAAATTCTTTTCTCCTTTGCCTTATTATACAATGACTGAAGTTGAAGTTCCTCAATTTTTTGTATGTCCCATTTCTCTTCAGATCATG AAGGACCCTGTGGCAACCATTACTGGCATAACATATGAGAGAGAAAGCATTGAACATTGGTTGCAGAAAGCAAAAGATTGTATGTGCCCAGTTACAAAGC AATCACTGCCAAGAAACTCGGAGTTCTTAACACCTAACCACACGCTTCGAAGGTTAATCCAATCATGGTATTCATCAAATGAATCAAACGTTAATGATAA GATTTCAAGTCCAACATTCCCTCTTGAAAAGATCCATGTTAAGAAACTCGTTGTGGATCTTGAGGTTCCATGTTACTTTGAAAAGGCAATGAAGAAAATG CATGGTCTGGCTATAGAGAGCGAGAGAAATAGACAGTGCATGGTGGAAGCAGGAGTAGTCAATGCTATGGTTCATGTTATTGCAAAGAGTTTCAAACAAG GTAGGACCAGGTGCCTTGAAGAAGCACTTATAATTCTTCGTCTACTTTGGAATAGTGCAGCCATGGTCAACAATATGAAGCACTA BLAST |
Tissue | pods |
Gene name | LI_gene_127638; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_324981
Blastp | E3 ubiquitin-protein ligase PUB23 from Arabidopsis with 42.35% of identity |
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Blastx | E3 ubiquitin-protein ligase PUB23 from Arabidopsis with 42.68% of identity |
Eggnog | e3 ubiquitin-protein ligase(ENOG410YC1Z) |
Kegg | Link to kegg annotations (AT2G35930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_017407794.1) |
Pfam | U-box domain (PF04564.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |