Ll_transcript_297620

• Id Trinity: TRINITY_DN37094_c0_g1_i1
• Name Transcript: Ll_transcript_297620
• Sequence: GTTTAAGGCAGAGTTTCATCTGTTATATAAATTCACAAGTCAATACATAGTGAGAAGTGAAGTGAGGTAGGGTTTGATTTCCTCTCTGCTCCAACGAAAA CAATGACACTTTACCGCCTCATCCTCCTCCGCTCCCTTCGCCGTACCTCCTCCTCTCTCCTCCACCATCATCCTCTTCATCTCATCTCCCAATCTCGATC ATTCGCCTTTTCCTCCGCCGAAGAAGCCGCCGCTGAACGCCGTCGTCGCAAACGCCGTCTCCGCATCGAGCCTCCTCTTAACGCCATCCGTCCTCCTCCT CACCACCCTCAATCGCGTGACCCCAACGCTCCTCGCCTCCCTGACTCCACCTCTGCGCTTGTTGGCCCTCGCCTCAGCCTCCACAACCGTGTCCAATCCC TCATCCGCGCTGGAGATCTCGACGCAGCCTCTGCCGTCGCCCGCCACTCCGTCTTCTCCTCAACCCGCCCCACCGTCTTCACCTGCAATGCCATCATCGC CGCCATGTACCGCGCCAAGAGGTACAACGAGGCCATTGCCCTCTTTCACTTTTTCTTCAATCAGTCAAATATTGTTCCTAACATTGTTTCTTACAACAAT GTTATCAATACTCACTGTGACGAGGGTCGTGTTGATGTTGCTCTTGAGGTTTATCGCCACATCATTGCCAATGCCCCTTTTAGTCCCTCTCCTGTTACAT ATCGCCACCTCACTAAAGGTTTAATTCAGGCAAACCGGATCGGCGAAGCACTTGACTTATTACGCGAGATGTTGAATAAAGGTCATGGCGCCGATTCCTT GGTTTATAATAACTTGATTTCTGGTTTTCTTAACTTGGACAATTTGGATAAGGCCAACGAGCTTTTCAACGAACTTAAGGAGAGGTGCTTGGTGTATGAT GGGGTTGTCAATGCTACTTATATGGAATGGTTCTTTAATAAGGGTAGAGGTAAGGAGGCCATTGAGTCATATAAGTCCTTGATGGATCGCCAATTTAGGA TGACGCCTGCAACATGCAATGTCTTGTTAGAGGTGTTGCTTAAGCATGACAAGAAAACTGAGGCCTGGGCTTTATTTGATCAGATGTTGGATAATCACAC ACCTCCAAATTTCCAAGCTGTGAATTCGGATACATTTAATGTCATGGTCAATGAGTGTTTCAAGCTAGGGAAGTTTACGGAAGCACTTGCCACTTTTAGG AAGGCCGGAACAAAATCAAATTCAAAGCCTTTTGCTATGGATGTTGGAGGCTACAATAACATCATTGCTAGGTTTTGTGAGAATGGGATGCTATTGGAAG CAGAGACATTATTTGAGGAGCTATGCTCGAAATCTTTGAGCCCAGATGTGCCGACTCATAGGACATTGATTGATGCTTACTTGAAAATGGAGAGGATTGA TGATGCTCTGAGGGTACTCAATAGAATGGTGGATGCTGGTCTGAGGGTTGTTGCTAGCTTTGGTAACAGGGTGTTCAGTGAATTGATTAAGAACGGGAAA GCTATTGATTGTGCCCAAGTTTTGAGTAAAATGGGAGAAAAGGATCCCAAACCAGACCCCACATGCTACGAGGTGGTGATCAAGGGACTCTGTGCTGGGG ATTTTTTGGATAAAACACAAGAGTTACTAGATGAGGTTATGAGATATGGGATTGGGGTCACTCCTGCCTTGCGAGAGTTTGTGATTGAGGCTTTTAAGAA ACTTGGGCGGGATGTGGAGATTGAGAGACTGCTAGATATTAATAGATTTGGACACAGTCCTCGTCCATCGGGGCCAATACCTCCATACCGTCCACCACCT GCAAGATTTGGACATGGTTCTCTAATTTCAGGTCAGCAGCACTCACCTTCTGGGCCTCCACCTCATGTTTCAGGACAGCAGCGCCTGCCAGTTTCTTCTG CTCAAATGACTGGTATGCATCAACCTTCATGGGGAGTTCCTCCTCAAGTGACTGAGGCTCATATGCCAGCATCTGGACCTCCACCTCATACCTCAGGACA GCACTTCCGCCCACCATCTGAACTTCCTCCTCATATGACAAGAACTCATCAGTCTACTTTTGGGGTAGTCCCTGACCATTATGCACCATCTGGACCTTCA CTTCAAATGGCAGGACATCAACCTTACGGAACACCATCTGGACCTTCACCTCAAATGGCTGGACATCAACCTTACGGAACACCATCTGGACCTTCACCTC AAATGGCT
• Tissue: pods
• Gene name: LI_gene_128657;
• Additional information: details;

Expression of Ll_transcript_297620

FPKM

• PAB: 1.3
• PNAB: 8.5
• PS1: 6.8
• PS2: 5.7
• PS3: 6.1
• PW1: 4.5
• PW2: 4.3
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_297620

• Blastp: Pentatricopeptide repeat-containing protein At1g10270 from Arabidopsis with 67.28% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g10270 from Arabidopsis with 67.76% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G10270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418882.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;