Ll_transcript_428141

• Id Trinity: TRINITY_DN39237_c0_g1_i2
• Name Transcript: Ll_transcript_428141
• Sequence: TATCGTTCTTCTATGTCTGTTGTCAATTCCAAATTTTGCGCAGCCACCAATTTTTGTAAGTGTTTCAGTGCTTAGTGAGGGTAAGAAATGGAAACAAAAC ATACAGGTTCTAAAGGAGCAGAAGCACTTTTACATCTATCTCCTGGATCATCAATTTCTGTTGCATACCACCCGGTTTTTGGATCTCATGACGATGTCAT TCTTCTGGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGAATGAAAGGGTGATCGTAAGAGGACAACCGGACGAAGATGCAGTTCTTTGTACTCCATCG AAAACATATGCTATGAAGTTTGTCGGAACATCCAATTCTGTTTTGCTTGTACCACCAGAAAATCAATCAAAATCATATGAAAATCTACAAGAGAGTGATG GTAATGATGATGTCAAGAAGGTTGTGGCACCCGTGATCAAAGTTGTACCTGGTTATATGGAGCTTGTTGAGGTTGCCCCCAGACTCGATAAACTTAAATC GCTTCTTTTAGAGAACCCTTACAAGCTTGAAGAGTATGACGCTGGAGATTTCGAAGAGAATGAGGAATCTAGGACAGGGCTATATAACTGGAATAATCTG ATAGACAATATTCAAGCTAGTGATGAGGAATTAAGGTCCAGACTGCAGTCGCTTTCAGCTGTGGAGATTAATGGGTACTGGAGATTAGTACATGAGAGTT ATATGAACATGATTCTAGAAATGCTTTTGAGAAATTCAGTGTTAAATGATTGGCTACTTGACGCTCTGAACGAAGATGAGGTTGTTAATATGCTGGAAAC GGATGGATTTCCCGGCATACTTGCAAGGCATTGTTTGCATGTATATGGTGCTAAAGTAGATGATTCCATGGATAGCTGTATCTGGAAGTTGGATAAGAGG CGTGTATGCATACATTTTGCAAGAGAAATCCTGAGAGGAGGAAAGAGGAAGTTGGAGAGCTTTATAGATGAATGGAGGCAAAAGACTCCAGATGGAATGG ATCCCACTTTCGATCTTTTAGAAGGAGAGGTTTTGACAGAGAAACTTGGAATTGAGACATGGGTTAGTGCCTTCAGTGTCTCTTCTTTGCCTTCTACTCC GGCTGAACGTTTCTCTATTCTATTCCGAGAGCGGCCAAGATGGGAATGGAAAGATCTACAGCCCTATATCAGGGATCTGAAAGTACCAGGCCTGTCTGCA GAAGGTTTGCTACTTAAATACACTCGAAGAACACAACCATCATCTGATGCCGAACCTGTTTTCAGTGCAAGATAATATGTAGTTGTTCCTGAGTTATTCT CTTGTGCATGATTTTGGATGGACCATGTCAATATAGTACTTGCATAAAAAGATTAGAACTGTTTTGTATTTCCGCTATATTTAGTTAACTTGGTCCATGT TTCATTTATGTATGTAAAATCAAGATACTTTTCAATTTAAGACAACATTTGTCCAAAAAATCGGACTAGAATCACAAGCTTTGGCTGCTTGTATATGGAA ATTGCTGCCCCCTCCTATAATGTAAGTACAACTGAATACTGAGATTTGAGGGAAACTCAATGGGACTCATTGGTAAGCTAGAAGTTTCTGTGACGGAACT GCATTGTCCGGTTACCGGCATTATGTTGGTAAATCAGTACTTGTCGGAACGAATTTGGCCAAGCTGCATGGCATCACCATTACTAAATTTCAGTGACTAT TAGTTGACTAAGAAACCTTGGCAGATATGGTATATCATGAACATAAAGTCTTAT
• Tissue: pods
• Gene name: LI_gene_130826;
• Additional information: details;

Expression of Ll_transcript_428141

FPKM

• PAB: 0
• PNAB: 2.5
• PS1: 1.4
• PS2: 0.8
• PS3: 1.6
• PW1: 0.7
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428141

• Blastp: Sister chromatid cohesion protein DCC1 from Danio with 32.88% of identity
• Blastx: Sister chromatid cohesion protein DCC1 from Danio with 32.88% of identity
• Eggnog: defective in sister chromatid cohesion 1 homolog (S. cerevisiae)(ENOG41108M8)
• Kegg: Link to kegg annotations (447872)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459359.1)
• Pfam: Sister chromatid cohesion protein Dcc1 (PF09724.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;