| Id Trinity | TRINITY_DN41001_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_519818 |
| Sequence | GAACTACACAATCCATGCACCTTGTTTTCTTAGTTGTTCCCCTCATTGCTCTTTTTGCATCACACTCCAATGCTTACCCTCTCTCAACACACAAAAAGTT TATCATAGATGATTCCACAGGCCAACGTGCCAAACTTGTGTGTGGCAATTGGGCTGGTCACCTCACACCAATGATTCCTGAGGGTCTTCACAAACTTCCC TTGAAAGACATTGTTGGTCAACTAGTTAAGTACAAATTCAACTGTGTTCGTCTCACTTATGCTATTTACATGTGGACAAGGTATAGCAATAACAAAGTGA GTGATACCTTTGCCACTTTGAATCTCACTAAGATTGTTCAAGGCATATCTAAGAACAACCCTTGGGTGTTGAATGTGACACATATTAATGTGTTTGAAGC AGTGATCAAAGAGCTTGGTGCTCAGAATGTGCATGTATTGCTTGATAACCATGTTAGTAAACCTCAGTGGTGTTGTGATAATGATGATGGGAATGGTTTC TTTAATGACATGTACTTTGATCCTAAAGAGTGGATCCAAGGACTCACTTTGGCAGCCAAACACTTTGCTGGAAATTCTGCTGTTGTAGCACAGAGCTTGA GGAATGAACTACGTGGTCCACGCCAAAATGAGATTGATTGGTACAATTACATGAGCCAAGCAGCATTAGCCATTCACATGCAAAATCCAAAAGTTCTAGT AGTTATCGGAGGATTGAGTTATGCCACCGATCTTCATTTTCTGAGGAATAGATCATTGGAGATAGATTTGGGTAATAAAACAGTATTTGAGACACATTTG TACGCATTCTCTAGAGCACCAAGAGAGACATGGCTTAAGCAACCATTGAACATGGTATGTTCCAATGCTATTAAAGGGATAGACGACAGAGATGGGTTCC TTACTACTGGTAATAATTCAGCTCCTTTAATCTTTTCCGAGTTCGGGTTTGATCAATCAGGAGGTTATGTTGCAGACAGCATATTCATGACATGCCTCCA AACCTACCTTGTTAGTACAGATATGGATTGGGGTTATTGGTCCTTCCATGGCAGCTATTATATAAGAGAGAATATAGTTCAATTTGATGAGATATTTGGT GTATTGAACTCTGATTGGAATGGTCTTAGAGATCCAAACTTCCCTGACAAGTTCCAGCTTTTGCAAAGGAAGAACCAAGATCCTACTTCCAAAGGCACTA ATGCATATATCTTGTACCATCCACTAACTGGTAAATGTGGCCTAGTGAATAACAAGAATGAACTTGAACTTGGTAGCTGTGAGAGCCAAAACAGATGGAG TTATAATGGATCTGTTATCCTTCTGAATAGCACTAAGAAATGTTTAACTAATTCTGGTGAAGGACTTCCAGTAATTGTATCTGATGCTTGTCAAAGCCAA AGAAGTTTTTGGAAACCTGAATCACTTTCTAGGCTTCATTTGGCTACAACTGATAAAGATGGGAACCAACTTTGCTTGCATAAAAATTCTAACTCATCCA GCATTGTTACTTCTAAATGTATCTGTGTAAAGGATGATCCTCTATGTTTAGATAATCCTCAAAGCCAGTGGTTCCAGCTTGTTCCCACCAATGTATGATT CTCTTCATGGATTATCACTTAGCACACCCCTTGTGCTTTCTTAATGAATAATCTTTTCCTTTGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_132805; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519818
| Blastp | Endoglucanase from Paenibacillus with 21.76% of identity |
|---|---|
| Blastx | Endoglucanase from Paenibacillus with 21.45% of identity |
| Eggnog | Glycoside hydrolase Family 5(COG2730) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020213289.1) |
| Pfam | Cellulase (glycosyl hydrolase family 5) (PF00150.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |