| Id Trinity | TRINITY_DN41033_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_519791 |
| Sequence | TCGCAGCTCTGGATCCATTTCGTTTTCCTCCTTATACCGATTCTTCTTTTCCGCCATCATATTCCAATATGTACGGACCCAGAGGGTAAGTTCTAAACAA TTTTTTTTCTGTTTCTTTCTTCAGATCGTGTTTTGATTTATATGTGGTGATGATGCTTTAAAATTCACCTATTTGTTGAGATTTTTTTGTGGAAATACAT AAAAATAGTTTCTTTTTCATGTATATGTTTATTTCCTATGAATACTAATGGAAACTTTGCTTGTTTTGATTGATTTATTGTTTCTGTGAAATTTTTCATC CAATGAATTTCTAGAGATATATATAAATTTTCAATCTTGAGAGTCAGTTAAAACATCTGTTTTTTCGTGATCCAATAAGATTGTATTGAACTGGATTTTT ATGTTGGTTGTTATGCATTTTTGTTTATTTAAACCTTTGGAGCTTTATTAGTTTAGTGTTAGTCCTATTGCTTTTTTGGTATAATGTAACGAAGGGCATC TCCTCACATTATCGGTAAGGAACTAATCCATTTTGTGATGCGTAATTACCCCTCTCAACAAGTGGCGTTCTCAGGAGTTGAATCCTTGACCTTTTGGTCT ATTTGAGGATCTAGTGGGACCTTACACTACTGGGACAACGCCTTGTTGGTAGGCGTATTGCTTTTTGATGTTTGAGTTGCTAAATATTTTATGGGTGAAA AAGTTGATTTGGTTCATCTAGTATAATTGGTTTATACTATGTTACTTTCTTTTATCTTGTTTGGTTTTAGGGTGTATTTTGTGGTGAATATGATTTATTT TATGGCATTAGGAATTAAAGTTGGGTGTCTGGGAAACGTTGGGTTGGGTTTGGATTTATTAACATGTTGAGTGGGGAATTTTTTATTTTTTGGGTATGGA AATTGAAGGGCAATGTTGGGAAGCGGGGGGGTTTCGGACGGGTACGAGGTTGGCTCAAAGAGACAAAGAATGATGGAATCCAATCCATACTTCGCAGTGA GCAGCGGAGCAGGCAGCTTTCAACCTTATGGATATGCTGGTGGTTTCCAGCCTCCTCCTCCTTTTCCGGTGGTTCGTCTCAGGGGGCTTCCATTTAACTG CACTGATATTGACATTTTGAAGTTCTTTGCTGGAATGTCTGTTGTGGATGTGTTGCTGGTCAACAAGAGTGGACGTTTCTCCGGGGAGGCCTTTGTTCTA TTTGCAGGACCAATGCAGGTTGAGTTTGCTTTGCAGAGAGATCGTCAGAACATGGGTCGCAGATATGTGGAAGTGTTCAGGTGCAAGAAGCAGGATTACT ACAATGCTGTTGCTGCTGAGGTCAATTACGAAGGAATTTATGATAATGACTACCATGGAAGCCCTCCTCCATCTCGGTCCAAGAGGTTCAGCGATAAGGA CCAATTGGAATACACTGAGATATTGAAAATGCGTGGACTTCCGTTTTTAGTGACCAAATCTCAAATTGTTGAATTTTTCAAAGATTTCAAGCTTCTAGAA GACAGGGTACACATTGGATGTCGCCCAGATGGGAAAGCTACCGGAGAGGCATATGTGGAGTTTGTTTCTGCTGAGGAAGCTAAGAGTGCAATGTGCAAGG ATAAAATGACAATTGGCTCAAGGTATGTGGAGCTGTTTCCTTCTACACCCGATGAAGCTAGACGCGCAGAATCAAGATCAAGGCAGTAATCGAGATAATA TCCCCCGGGAAATATCTTGTTTTAGTCTTCAAACCTGGTTATACTTTCTGGTGTTAGTACATTGTTTTTAATTTTAGATTGTATGCTTTGAATATTAGTT GGACATGCCGGTTATATTTGAATGTCTGATTCCATTATTAATAGAAAGAGCTTTATATATAGAATACATGTGGCTGTTAAAATGTGTAAATCTCAGTCCC ATTGAGTCATGGAAGGCTCTTCTAGACTTCAATATTTATTTCAGCTGTGCAGGTCATCATCTAAACATGATCAAACTTGTTTGTGCTAAAGCACTGCCTC AATGATTGGACCAGTTTATACCAACATGATTTTCCATAGCCAAGTTACTGATAACCATGATCCCATTTTTTTATCTCATTGTGTAGACTGTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_132849; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519791
| Blastp | Heterogeneous nuclear ribonucleoprotein F from Rattus with 33.99% of identity |
|---|---|
| Blastx | Heterogeneous nuclear ribonucleoprotein F from Rattus with 31.25% of identity |
| Eggnog | heterogeneous nuclear ribonucleoprotein(ENOG410Z6M0) |
| Kegg | Link to kegg annotations (64200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424310.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |