Id Trinity | TRINITY_DN41257_c0_g1_i2 |
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Name Transcript | Ll_transcript_427758 |
Sequence | CAAAAATACAGTAATAATCCCCTCACCATTTTCTAATTCCAACCCTTATAGCTTTCACTTCTCTTTCTCCTCCACCTCTTCCAAAACCCAAACCCAAACA AAACCTCACTCTCTCTTCATCACTGCGATTCATACAAAAAATAAGACCAAAATGTTGTGCTTTCTTTTAAGAAGCGCAGCATCTAGCTCCAAAACCAAAC CATGGAAAACAAGCGTAACTGCAATTTCTTCTCTCAATTACTCTTCTAAGGTCCCTTTCAAACCCGATCCAAAAAAACCCACTTCTGTGACACCCTCCTC CTCCGCTCCTTCCGCCGCTGACACCCTCTTAGATGAACAAGAACGCTTGCGCCACCTTGCCGCCGATGAGAAGGACCCATCTCTTGATGTGGGACCCAAT GGCCGCCCACTCTTCACTTCTGCCGCTTCCTTGTCCCAGTTCACTCGCCGCGATACCTGCTCCTATTTTAAGCTCACGAATGAAGCTTTGAAGACGGTGC TTCCTGAGGGATTGCCGACGGGGATGGTGAAGGAGTTTGAGGATTCCAAGCGAACTGCATTGCTTGTTCGACAGAGCTTCTTGGACCTTCGTGACAATTT CCGCCGTGTCGTTGATCCCACAATTGGGTCTTCTACTGGTAAAATATGCTGTTTTTATGTCGTTTTTAATGTGCCCCAGATGCTAGTTTTGTGTTGAATT GATGCTGAGTTCGACTTTGGGTGTTTCACAATGCATTTCTCACAATTTTTTGAAAACCAAATTGCCTGGGTTTTGAGTTATGAATAGATTGGGTTAAGAG GAAATTACACTAACCTTCCTTGAGGTTTAGCTTAATTACCCTGGTTACCACTTTTGTTTCAAATGTTACACTCATCACATGTTTATGGATATAGGTCTAT GTATTTTCAGTATCACCCTTTAGGTCTTGGTAACTGTATCGATAGTTGATGTGTTGTTTCACATAAGAACAATGTTGGGTATAATTAATCTAAAGCATAA GGGAAGTCAGTGTGATTTCCCCTTGGTTTAACCAGCTAAATTGGAAGTTTAACTCGGGCTAAACAGTCTAACTGACTGGTCCGGTCCAGATTATCAAACA TTGATTTGTTAGTCTAAATGTTATGTATGTGAGTTTTTTTCCTTATTCAGGGGTCAAAGTTAGAAAGCAAGTTGTGTTAGATGGTCCTGTTAGCTGTGGG AAGAGCATTGCACTTGCAATGCTTGTGCAATGGGCTAGAGAAGAAGGTTGGTTGGTTTTCTATGTTCACAGAGGCAAGGAATGGACTCAGGGAGGATTTT TCTACAAGCATCCGTTAACAGGTCTATGGGACACACCTGTCCAGGCTGAAAATGTGCTCAAGGATTTTTTGAAGTATAATGAGTCCTACTTGAAGCAACT GCCATGCCAAATACTTGATCCGATCCCACTGGGTGAGGGTGCTGGTGTTGGATGGTTGAAAGATGCTGATTCCTTGGCGATTTCTGAAGGTACAACGTTA TATGAGCTGGTGACGACTGGAATTGAACAAACACATGCAGCTGTTGCAGTGGTAGTTCGTTTGAGGAAAGAATTATCACTTGTTAAAGACATACCTGTAC TTTTTGCAATTGATCAATACAATAACTGGTTTACATTCAGTGAGTATGAAGAGCCAGTTACAATTCGTTCTTGTCGGCCAATACATGCTAGAGAACTTGC AATGGTGAATGCTTTTCGGCCAATGAAGCATGATGATATGATGGTAGGTGCCTTTTCTCATTCAACAGCTGTAGGAAAGCTTAGAAAAGACTTACCAGAT GTTCCAGTAGATGCTCGCGTAACGTTTCCTCGATACACTTTAGATGAAGCTGAGACTGTTTCCCATTATTATTTAAGGCAAAGGCTTATCAATCGTGAAG TGTTCTCAGAAGAAAATTGGAAGAAAATATACTTTCTGTCCAATGGAAATGGAACAGAGATGAGGGGGTTACTTCCTTTCATGAGATGACAGACACTAGA TGCACTATTTTTTCAAAGGACAATGTTCTATTACTGTTACCAATAATGTTATTGATGTTAACTGTTTCATTTTGAACTTTTCATCATAGGATACGGTGAG ATTACTATTTGCAATTTTGCATGATCTTAATTAACATGGAGAATTGTTGTTCAAGGCATTGTACGTACCACTATGTATATTAATTTGCAGCTTGTAGTTT TAGAATTGGTATTAATTTTCATTTGAGTTGTGAGTACCATCATTTTTCTTATATTTTTTTCGGGAAAATGATATTCTTATTTTTTTTTGTACTACGTAAT G BLAST |
Tissue | pods |
Gene name | LI_gene_133105; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_427758
Blastp | 28S ribosomal protein S29, mitochondrial from Homo with 25.6% of identity |
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Blastx | 28S ribosomal protein S29, mitochondrial from Homo with 24.92% of identity |
Eggnog | Death associated protein 3(ENOG410XSDC) |
Kegg | Link to kegg annotations (7818) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419787.1) |
Pfam | Mitochondrial ribosomal death-associated protein 3 (PF10236.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |