Ll_transcript_417135

• Id Trinity: TRINITY_DN41348_c0_g1_i3
• Name Transcript: Ll_transcript_417135
• Sequence: CTTTCATACTGGCCCATCAAACCAATACCCTCTTTCAATAACAAAACAGCGCTCACCTCTTCACTCTCTCATTGCTATACCATCCCACCACCGTTCGCGG CGGCTCCCACCGATTCCGGCAACCATATTCGAATTTGTGACACTTTCTCAGTTGAAGTCTAGCAAAATCATATAATGCCCCGAAGGCCAAGAATTCATCG CCAACGACTCAAAACTTTGCCAATTGGATTCTCCCCTTTTGCACGTGCTCTTGCTCGTATGGACTCTAGTTCAACAGCGAAGTATCAAGCACGGGACTCA GAATTCATTGAAAAGCCTAACCCTAGCTCTGCTGGTGATGGATTTGCAGAGCAGCCTTCGGATGACGAAGCAGAACAGTCTGCTTCATCATCAGATGAGC AGTTTGATGGAGTTGTTCAAGCAGATTTTTCCTTTTTCGACCCTAAACCTGCTGATTTTCATGGAGTGAAGACCTTGCTGCAAACTTACTTGGATGATAA AGAATGGGATTTGAGTGGCTTTGTAGATTTGATTTTGGAGCAGACCACAGTAGGAACTGTTGTTAAGATAGAGGATGATGAGGATGAAGGACTTTTTGCT TGTGTTAGTGCTCTTAATTTATGGAGATATAGGGAGCAAAAATGCATTATGGAAGTCAAGGACTACCTCCGTAAAGCGTGCAAGGAAAAGGGTGTTGCTG ACAAATTGAGATTGCTTTTGGAGGAACAAGCACGTAATGTTGGTCTGTTGGTGTCACAGCGTGTAGTGAACCTTCCTCCCCAGCTTTTACCACCTCTTTA TGATGGTCTCTTTGATGAAGTGTCATGGGCCACAGAAGATGAGCCAACAGAGGACCTCCGGAAGTCCTTCCAGTTCAAGCATTATATAATACTTAGCAAA ATTTACAAACACAAGAATGCAGAACAGAAAAGAAAACTGAGTGATGATAGTGAGGAGGAAATGATATATATAAAGCCAGAGGACGAAATTTTTCACAAGT TAAGCTCGTGGTCCTTCATTTTTCCATTGCAACCTCAGCAGCCTGCACCTCATGAGGCAAGTTTTATGATTCTTGAATCTCAGTTAACATTATCGTGATG TTATTTAGACTTGCTGAAAGTTATTGGTTTTGGTCATTTTCTTAAAATACAGTGCTAAAGTGCCACCTCTGTTTCTAGGCAAAATACAGACTAAACTAGT CAAATACCTGTGCACTACACGGATTCGATCTTAATCTGTTCTAAACCTTAATTCAGTTCTCACAATAATCTCACCCATCACCAGTTTGGTCTTCATCATT CACATATCTAGATCATAATTCATAGCCATTTAATTCTCACTCATCTTATTATATTATGGCTGGTAAACAAAATAATGATTCAGTTCCATACTTTATTGAA TGGAATTATCATTTTCATGTTTGTCAGCATAAAATAAACTTACAGAAATTGTGGCATGCCTCAATCCATAGAATCAGAAGTCACTATCCATTATAGGAGT GGTTAGATTGTGGATTCCATACTCCATGTATAATAAGATTGACTTTTTCCCCAATCATAACCTTATTTATTTTCAAATATACTCATGTATTAAATTATTT TCAAATATTGATGTAAAATTAAAGATTAAAAACACTTCAAAAAGGTAGAAATGAGGGCTGAAACTGAAAGAAGATAAACATTGAGAAAGAGAAACTTAAC AGTGATGATGAAAAAAGGGTACACATATTTCAATGAAGATAGAGGAAATATTTAAAAATGAGGACAATTAATTAAAGATCCAATGGTATAAAATAAAGAA TTAATGAATCCAAAGCAAGAAAAATGAGGAGGGATTTATTATATCAAGATGGCCAATGATCAATACAGAATACAAGCCAAAAAGACTGAAGTCCATTTAT TTGTTACATTATTAACCTATCATGTTGTAGAAATGGTTTGTAATATCTTTTTTGTCCATTTATATGTTTATGTTTCTGCTTACTACAGCTGAAGAATTAC AAGCCAATGGGATTAGTTTTGGCTGTTGAGGCAGACAAAATTCCAACTTTCCGTCAAGAATTGGTTACTTTAATAAGTGAAACCTGAAAACAACCACAAG ATTCCTGCATAATTTATCACGTGATAGAGTCTTTAATAGTAATACTTTTCTGAATCTTCCCAAGTTTTTAAACCCCATCTTTCAGGTGTTTGAAATACCA ATTTTTGATAGTTATTTTTATTTATACTCTTATGGTCCCTTTTGTTCTGCAATGACTATTGATACTTCAGTTGCTTTTAGGCTGTGGTTAGTTTCTACAT TGCATTGATTATGAATGCCACCCTTTTC
• Tissue: pods
• Gene name: LI_gene_133214;
• Additional information: details;

Expression of Ll_transcript_417135

FPKM

• PAB: 0.5
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.5
• PS3: 0.5
• PW1: 0.2
• PW2: 0.2
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417135

• Blastp: Protein BCCIP homolog from Arabidopsis with 57.1% of identity
• Blastx: Protein BCCIP homolog from Arabidopsis with 56.9% of identity
• Eggnog: Involved in nuclear export, actin cytoskeleton organization and vesicular transport (By similarity)(ENOG4111GYV)
• Kegg: Link to kegg annotations (AT2G44510)
• CantataDB: Link to cantataDB annotations (CNT0000597)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462559.1)
• Pfam: p21-C-terminal region-binding protein (PF13862.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;