Ll_transcript_428477

• Id Trinity: TRINITY_DN42056_c0_g1_i4
• Name Transcript: Ll_transcript_428477
• Sequence: GTTTTCTCCGATAACAGGATGGTAGCCTCACTTCAAAAGCACTGACAAAGACACATGCATGTTCACGCACTCAACGGTCAAGATTCTCTCATATCCAATC ATCAAAATCTACGCCACCGTTTGATTCGATACTCTGAAACCCCTCAAAACTATAACCATAATGGTTACCATGATTTAACCATGGTTAAATAAAATTGCAC CCATCAACCAATTGGGTTTGAGAATTAAACTTTGTTTATCTCTCTCTGAGTTTTTCAGACTTAACATGTGAGTGACAGAAGAAAAATGGGTTTGGGTCTA TCATTCTTTCTCTCTCATTGATTTTGTGATCTATAACGTAAATTACACTTTGTGCAAAACTTATTTTTCTCAGATCTATTAAAGCTAATATATTTTTACC GTTGTTTTCTGTGTTTTATTTATATCATCATCATCATCATTTGATTTGCAAAATCATAATTTTTCTCTTTGATTTTCTTTCATTTCTCTCCTTTTTTTTC TTTCTAGGTGTATTTTACTTAGAAAATTTAGTTTTTTGTTTGTTATTCCTATTGTAGCAGATCCATGCTGGGAATGTAAATTTTTAATTTTTATCAGTAC CCTTGTAGTTTTGAATAATATTGTTTTTTTTTGTTTTTTGGTAGATCTTCCATGATGTTCTAGATCTTATTATCTCACTCTTTTTTAGTTAAAGATCTTG TTTCACAGGGCATTTCAGGGTTTAGATCTTGGTTTTTTGTGATGCTGTAGTAGAACATCAAATTTAGAAAGTTCTGGTTTTTTTTTATTCATGTTTTATT TTATGCCTTTTTCTTTTGAAGGATGAAAATTTTCCTTGAAAGTTGGGGTCTTTGGATCACTAAGTGAGAAAGTTTAGGAAACAAAAGAAAAAAGGATGAA CTATTTTCCAGATGAGGTAATAGAGCACATTTTTGATTCAGTGGTGTCACACCATGACCGCAATGCATTATCTTTGGTATGCAAAAGCTGGTATAGAATA GAGAGATTCACAAGGAAGAGTGTGTTCATAGGGAACTGTTACTCCATTAGTCCTGAAAGGTTGATTCAAAGGTTTCCTGACCTTAAATCTCTGACATTGA AGGGAAAGCCTCATTTTGCTGACTTTAGTTTGGTTCCTCATGGTTGGGGTGGGTTTTTGTATCCATGGATTGAGGCATTGGCCAAGAGCAAGGTTGGATT GGAGGAGCTTAGGTTGAAGAGGATGGTGGTCTCAGATGAGAGCCTGGAGTTACTTTCTCGCTCGTTCCGGAATTTTAAGTCTCTTGTTCTTGTTAGCTGT GAAGGGTTCTCCACAGATGGCCTTGCTGCTGTAGCTGCAAATTGCAGGTTTCTTAGGGAGCTGGACCTGCAAGAGAATGAAGTTGAGGATCATAAAGGCC AGTGGCTAAGTTGCTTTCCTGAAAGCTGTACATCACTTGTCTCTCTAAATTTTGCTTGCCTTAAAGGAGAGATTAATCCGGGAGCTCTCGAGAGACTTGT AGCCAGATCACCTAACCTTAAGAGTTTAAGGTTAAACCGCTCTGTTCCTCCTGTTACACTTACAAAGATAATGATGACAGCACCTCAACTAGTTGATTTG GGTATTGCATCATTTGTCCATGATACCGATTTATTTATCTTCTTTGATATGAAGGACACCATTGTAAAGTACTGCAAGTCAATAACCAGTTTGTCAGGGT TTATGGAAGTTGCTCCTAACAGCCTTTCAGCTTTATATTCTGTTTGCCCAAACTTAACGTCGTTAAACCTGAGCTACGCAACAGGAATTCAGGGTAATGA GCTGATTCATCTAATTCGCCATTGTGGGAATCTTCAACGCCTATGGATAATGGACTGCATTGGAGATATAGGGCTGGGTGTTGTAGGAAAAACATGCAAA GATTTACAAGAATTAAGGGTTTTTCCATCCGTGGCCTATGGAAATCTTGATGCGGTCACAGAAAAGGGATTGGTTGCAATATCAAAGGGTTGTCCTAAGC TTCATTCATTACTTTACTTCTGCCATCAGATGACAAATGCTGCCCTCATAACAGTGGCTAAGAACTGCCCGAATTTTATCCGCTTCAGGTTGTGCATCCT TGATGCAACAAAACCTGACCCAGATACACTGCAACCACTGGATGAAGGTTTTGGGGCAATTGTGCAGTCTTGCAGGCGTCTTAGACGGCTATCACTCTCT GGCCAGTTGACCGACCGAGTTTTCCTTTACATTGGAATGTATGCTGAGCAGCTTGAAATGTTGTCTATTGCCTTTGCTGGAGAGAGTGACAAGGGAATGC TCTATGTTTTGAACGGATGCAAGAAACTTCGCAAGCTTGAGATAAGAGATAGCCCTTTTGGTAACGCAGCACTTCTGATGGACATAGGGAAGTATGAAAC AATGCGATCCCTTTGGATGTCATCCTGCGAAGTGACTGTTGGAGCCTGCAAAATACTAGCTAAGAAGATGCCGAGACTAAATGTGGAGATATTCAACGAA AACGAACAAGCCGATTGCAATGTGGAAGACGGGCAGAGAGTAGAGAAGATGTATTTGTATCGGACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATG TATGGACTCTGTAGGTGCATGTTAGGACATTTAATTTCTTGTTATTGAGCAGTTTGTACTTTGTTTAGGCTGTGACTGATTAATGCACTTTTAGCCGGGT GTAGTATTTTATGTTACTTGAATTTAGTAGTTTTATGCATATATTAGTTTTGCCTTTGCCTAACTCAAATAAATGTGTGGAGGGTGATGGGAAATTGTAA ATGATGGATACCCATCTAAAATGATTTCCTTATCTTAGTACAAGTTGTTTTTGAAAATATAAACCAAGCATGAATCAAAATTTGGAATATGAAACAAACA TGGGAATGTTTTAG
• Tissue: pods
• Gene name: LI_gene_134092;
• Additional information: details;

Expression of Ll_transcript_428477

FPKM

• PAB: 5.8
• PNAB: 10.5
• PS1: 8.7
• PS2: 6.5
• PS3: 5.9
• PW1: 7.1
• PW2: 8.1
• PW3: 6.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428477

• Blastp: Protein AUXIN SIGNALING F-BOX 3 from Arabidopsis with 73.88% of identity
• Blastx: Protein AUXIN SIGNALING F-BOX 3 from Arabidopsis with 73.88% of identity
• Eggnog: F-box and leucine-rich repeat protein(ENOG410XQ54)
• Kegg: Link to kegg annotations (AT1G12820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461211.1)
• Pfam: F-box-like (PF12937.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;