Ll_transcript_428612

• Id Trinity: TRINITY_DN42076_c0_g1_i2
• Name Transcript: Ll_transcript_428612
• Sequence: GAACATTCGAGATATGTGTCCGATATGGATTGAATTGGGCCGAGGTGAAGTAAAGTATAATAAAATTGAAAATATAGAGTGAAGAATAAGAAGAATAGGA AAAAATGGGTAGCCTAGAAGAAGAAGAAGTAATGGGTGAAGTTGAAGCCATGGAAGCTGTTTATGGAATCGATTTTCATCTTCTTCGTTCATTCCCTCCT CTTTTTCATCTTTCCCTTTTCCCTAGAACCGCTGATGATTCTTCCCAACAGTTTGTTGAAGCTATTATAGAGATACGAGCAACCCCTCAGTACCCAAGGG AACCACCTTGTGTTGATATTGTGGATTGCAAGGGTATGGATGAGAAGAGAAGAAAGCATTTATTACATCATATACAAACTAAAGCCCAGGAGCTCTGTCC CGGTTTCATGCTTGTTGCTCTATGTGAGGAAGCAGTTGAGAAACTTTCAGCTATGAATCATCCTGATGGCGATTGTCCATTGTGCTTGCTCCCTTTGGTC CCAATAGATCAGCAGAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCACAGTGAATGTATCATTAGATGGTGGAATTATCTTC AAAAATCTAAAGAAAAAGACTCTGCCAAGTCAGATAACTATAAAAAAGTGGAAGAGGGTATTGGAAACTGCCCGGTCTGTCGCAAACCTTTTCATGCCAA GGATCTGGAGCATGTGCTCGACCTAGTTGGTTCACATTCTTCCCAAGTAAGTTTCGATAGTGATAAGGCAATTGATGAGGAAGAGCTCCTTCAATCCGAG CATGAGATCATTAGGAGACAGAAATTTGAAGCCATCTTAAATTTGCAGAAGGAGAACAGTGGTCTCATTGAACCCAAAAAAGATTTAGTAATATTGCCCG GTATGTACCTTCCACAACCAGTCGCAACTCCGAGCTCCACACCAACCAATGAATCTGATGAGCAACAAGAAAAAGATATACCTACAGTCATCTCCGAAAA ACATGCTGGTGAAACCTCGAACGCGCCTAGTTCTAGCAGGCACAAGAATTTCGGTGCAGGGAGGCAGAGACCAAGAAGTGATAACCACTCTAGTTCGACC GTACGAAATCCGAGAAAACCAGTCCAACAACAGTGGGTTAGAAGAGATAATAATCCTAGCAGTAAGCAATAGAAGGTATCTCTCTGACTTCTATAGTTCA TATTTTTTGTTATATATCAGACTGATGTTTTAACTTTGTGGTTGCAAAGAAAGATACAAAACTTATAGTTGAGGACAGAGATTGAGACACATTCCCTTCC CCCTTTTCTTTGTAGGGGTGTAAGGTTGTTGTTGTTGGAAGAGTAAGCAAAAAAGCAAAGAGATATAGATGATGCTTAATTTTTGTGCAAATTCCTGAGT TTTCATTTTCTATTTTGGGTTGTCATAAAGTTTCTTTCTAAAGCTCCACCCTTGTAATTTGTGTTACATTTAGCAACTAAGTTGCAATGTTCAGTATTTT CTTGTGATGTTTATTCTATTCCTGGTTATCAATTCTGTCTTTACATTATTACCAAATTATATGATGCTCAGTTTGAAATTTTGAATATCAATGAAGTATA AAATATATATTGTTCCTCA
• Tissue: pods
• Gene name: LI_gene_134124;
• Additional information: details;

Expression of Ll_transcript_428612

FPKM

• PAB: 3.1
• PNAB: 3.5
• PS1: 5.5
• PS2: 7.7
• PS3: 8.4
• PW1: 4.6
• PW2: 4.8
• PW3: 6.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428612

• Blastp: E3 ubiquitin-protein ligase RNF25 from Bos with 24.36% of identity
• Blastx: E3 ubiquitin-protein ligase RNF25 from Bos with 23.1% of identity
• Eggnog: RING finger protein 25(ENOG4111H5K)
• Kegg: Link to kegg annotations (511571)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464814.1)
• Pfam: RWD domain (PF05773.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;