Ll_transcript_428565

• Id Trinity: TRINITY_DN42091_c0_g1_i1
• Name Transcript: Ll_transcript_428565
• Sequence: GAAAAGCCCATTAAAACATAAACCCTAATTCATAGGGAATAGTGATTAGTCAGAAGTGACAATGTTTTCTGTTGGAACCAACAAGAAGAAGAGCAATGCG AGAGTCCTCGACAACCACGATTCTCCGATCACTCCTCACCGTATCTCCGTCGATGAAACCGCCCTCCACAATAGACCTTCCACCGGCACCCCCGCTCCAT GGGCTCCTAGCTTATCCATTCTTGCCCGGGTTAATCAGGTCAACAGAACTCGAAAAGATGACACAACCGATTCAGTTAATCCTGTTTTTGTTGCTGAGTT TCCCCAACTAGTTCGCGACGAGCAAGCCTCTTTGCTCCGTAAGCGTGTTTCTGCTGAAGATTACACATCTGGTGGGATTGACAAGAGTACATCACTGGCT TGGATTATTTGTGGAAACAAGGTCTTCCTTTGGAGTTATTTGTCGCCTGCTTCTCTGATGAAATGTGTTGTTCTTGAAATTCCTTTTGATACTTCGGATG ATGGAGATGTTGACAGGAATGATGCTGGTAGCTGGTTGCTTTGTGTTGTTAATTGTGACAGCGCATCCATGGGAACCAATAAAGTTGCAAGACATTGCAA CTCAGCTGCTGTTGTTATGTGCAATAGAAAAACTAGGGCTCTTATATACTGGCCTGACATTTATTCTCAATCACACAATGCTCCAGTCACTAGTCTTGCA TCTTCTGATGAGTTGGAGGCTCTTTTGACACCTGATAGGAAGACTTCCTTCAACAGGCATCGGGGACAGAGTAAGCTACGCAGTGGTGTGAATGCATTGC CTCTGTTTAATTCTTTGATTGCTTCTCCGGTCCCGGATTGCAATTTTGTATGTGTTGCCCTTGCATGTAGCTCGAATGGTGAACTTTGGAAGTTTCACTG CTTTCCTTCTGGCATTCATCGGACGAAAGTATATGAAAATATTGTGCATTTCCCTCACCAAGGGGTCGGTGATTCAGGTCAATTTGTGAGCAATAAGGGG TATCCAAAGTCATTGACATGGTGTTCTCCACATTATTCTACTAAAGAATCAAATCGACAATTTTTGGTATTGACTGACCGAGGGATACAGTGTTTTAGGG TAGAGTTTAATTCTGATGTTCATGTTTCAAAGCTTTGGTCCCAGGAGATTGTTGGAACAGATGCTGAGGTTGGCATTAAAAAGGATCTTGCTGGTCAAAA GGAAATCTGGCTTCTTGATGTGATGGTAGATGATCGTTGTAAAGTGTTTACCGTTCTTTTTGCAATCTTTTGTAAGGACCGGATTAGCAGTTCAAGCTAC TTGCAGTATTCTCTGCTAACCATGCAATATAAATCAGGGTTGGGTGGAGAGAATACAAATGACAGGGTTTTGGAGAAAAAAGCTCCTATCGAAGTGATAA TCCCAAAAGCTAGAGTTGAAGATAAAGATTTTTTGTTTTCCATGAGGCTTCGTGTAGGGGGAAAACCTTCAGGTTCTACACTTGTAATATCTGGGGATGG AACTGCAACTGTCTCCCATTATTATAGAAACTGTACTCGACTCTACCAATTTGATTTACCCTATGATGCTGGAAAAGTACTAGATGCTTCAGTCCTTCCT TCCGCAGATGATTATGAAGAAGGTGCATGGGTTGTGTTAACAGAGAAAGCAGGAATATGGGCAATACCTGAGACGGCTGTCATACTTGGTGGAGTTGAAC CTCCTGAGCGGAGCTTATCACGCAAAGGCAGCTCAAATGAAAGATCCACACAAGAAGAGATACGAAATCTTACATTTGCTGGTAATTTTGCTCCTAGAAG GGCTAGTTCTGAAGCATGGGGTGCTGGAGATAGACAAAGGGCAGGTTTGAGTGGTATCACACGTCGAACTGCACAAGATGAAGAATCAGAAGCTTTATTG AATCATATTTTCAACGAATTTTTATCATCTGGGCAACTTGACTGGTCACTGGAGAAGCTAGAAACTTCTGGTTCATTTGAAAGGGATGGAGAAACAAATG TTTTTGTGAGAATGAGCAAATCGATCATTGACACTTTAGCTAAACACTGGACAACAACGAGAGGCGCTGAGATTTTGGCCATGGCTGCTGTTTCCACCCA ACTCTTAGAAAAGCAGCAGAAGCATCAAAAGTTCCTTCACTTTCTTGCTTTGTCCAAATGCCATGAGGAGCTGTGTTCTAGGCAGAGACATGCCTTGCAA ATTATCTTGGAACATGGTGAAAAGTTATCTGCAATGACTCAGCTTAGGGAACTGCAAAATCTGATTAGCCAGAGTCGTTCTACTAGTGTTGGCTACTCCA ATTCGAGTTTGGGTATTCAGATGTCAGGTGCCCTTTGGGACATGATACAGTTAGTTGGTGAGAGAGCTCGCCGCAATACTGTCCTTCTGATGGATAGGGA TAACGCTGAAGTGTTCTACAGTAAGGTTTCTGATCTTGAGGATTTCTTTTACTGCTTAGATGCAGAGTTAGAATATATTATAAGCCCAGAGCACCCTTTT GGGATCCAGATCCAGAGGGCGTGTGAACTCTCAAATGCATGTGTTGCCATAATTAGGACATGCTTCAACTATAAGAATGAGAATCATTTATGGTATCCAC CTCCTGAGGGTTTAACCTCTTGGTATTGTCAACATGTTGTACGTAAGGGGATTTGGAGTGTTGCTTCTATTCTGCTTCAGTTGTTAAATGGAAATTCTGG GCTTGATAAATCAGCAAAATTGGATTTGTATAATCATTTAGAAGCACTAGGTGATGTCCTACTTGAGGCATATTCTGGTGCTATTACAGCTAAAATTGAG TGTGGAGAAGAACACACTGGTCTACTAAATGAATACTGGGTGAGGCGTGATGAGCTTCTTGAATCCCTTTATCAACAAGTCAAAGAATTTGAAGATACCC AAAAGGACTCGATTGAAGGAGCTGAAGAACAGAGTGAAGAAGCAATTATGAAAGTTACGTCACATCTGCTATCAATCGCTAAACGACATGGATGTTACAA AGTTATGTGGACAATATGCTGTGATCTAAATGACTCAGAATTACTCAGGAACATTATGCGTGAAAGCTTGGGACCCAATGGGGGTTTTAGCAACTATGTC TTTAAGAAACTAATTGAAAGTAGACAATTTTCCGAGCTTTTAAGGCTAGGGGAAGAATTTCCAGAAGAACTATCCATTTTCCTCACGGAACAACCAGATC TTCTTTGGCTTCATGATTTGTTCCTTCATCAATTTTCGTCTGCTTCAGATACACTTCATGCATTGGCTCTCACTCAAAACTTGCAGTCTACCTCAGTTGC TGAAGGAGAAGAGGACTATATTAAGTCGAAGCTAAAATTGGTGGACAGAAAGAAGCTTTTGTATCTCTCCAAGATAGCTGCCTTCGCCGGTATGGCTACT GTAGTTGTGTATTTTTTAATGCCTTATGCATATTTTTTTATTTCCTTCCAGGCTATTTATATATCTATAGAATGTAGTATTACTTTTTTCTTACTAACTC TATTAGCTACTAACTTGTGAGATTTTGAAGTCATTTTTGCCTGTACCATATCTTTAGGATACCTGTACTGACGTTCTCTGTATTTAAAGTCGCAGATAAT ATCACTTAATATGGATAACGCAAAAAACATCACATTGCTTTTAGCCTTATGCAATTACTGTATGCCTTATAAGTTATAACTCATTCACCTTTGAGACTGG TTCTTAAAGTACTAAAATTTTGTCGGTGTTTATTTTCAGGCTTTTTTATTTTAAAAGATCCAATGCATATCTAATTTTTCAATTGGGCACTAGTTGTTTT ATAAGTTTAATGCCTATTTTTTTATTGGATATGAAACAAATATATATTCTAAATTGCATTTTTGATAACTACTATTACCCTTTCTTGTTCAACAGCTGGT AAGGATGCTGGTATTCAGGTGAAGGTGGATCGAATTGAGGCTGATTTGAAGATTCTAAAATTACAGGAAGAGGTAATGAAGTGTCT
• Tissue: pods
• Gene name: LI_gene_134144;
• Additional information: details;

Expression of Ll_transcript_428565

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428565

• Blastp: Nuclear pore complex protein NUP133 from Arabidopsis with 54.37% of identity
• Blastx: Nuclear pore complex protein NUP133 from Arabidopsis with 54.37% of identity
• Eggnog: Non-repetitive/WGA-negative nucleoporin C-terminal(ENOG410ZVJJ)
• Kegg: Link to kegg annotations (AT2G05120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460731.1)
• Pfam: Nup133 N terminal like (PF08801.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;