Ll_transcript_373690

• Id Trinity: TRINITY_DN42268_c0_g1_i2
• Name Transcript: Ll_transcript_373690
• Sequence: AGGATGATGCTTACGTGCTTCACTTAGCCTAGTCATAATTCATTCTTCTCCGCCTTCCTACTCAAGAAAATAATATTGAAGTTTTATTAAACGAAAAAAT ATAAAACCCTTCTAAAACCCTCCTTAAACCACTTTCCTAGTACTTACCCCCATAAGCATGTGGACCCCAACGCCGGAGACGCTAGCTTCCACTAAAACCG CCCTTTCCGTTGCCGCTTCACTCGCCGCCACCGCGGTTCTCCTCCGATCTACCGTTAACGATCTCATACCTGATACCGTCTACAACTACTTCAACTCCAA CTTTCGCAAATTCTCTAACCGACTCTCCTCTCACCTCACCATCATCATCGAAGAACACGACGGTCTCACCGCCAACCAAATGTTTGACACCGCCAATGTT TATGTGGGATCCAAACAACAATCTTCAGCGCAAAGAATCAAGGTGCATAAGCCACTCAAAGAAGAGCATTTACAAGTTAACATTGACAAGAACCAAGAGT TTTATGATTCCTACAAAGGCATAAAACTCAAATGGGTCCTCGTTTCTATGCAAAACAACAACATAAATCTTCATAACAAGCGTGATAGTCACAACAATGC TTCATTTCATCGAGTTGAAGTGCGTCACTTTGAGTTAACCTTTCACAAGAAGCATAGAGACACGGTTTTGGGTTCTTACTTGCACCACGTTCTTCACGAG GCTGAGGCAATTAGAGAGGGCAAGAAAACTTTGAAACTTCACACCATTGATTACAATGGCACTGATTATTGGAACTCGATTGTATTAAACCACCCTGCCA CATTTGATACTGTGGCCATGGAACCTGAGATGAAAGTGCAACTGTTGGAAGATCTGTGTAAGTTTCTGGATAGGAAAGAGTATTATAAGAGAGTTGGGAA GTCTTGGAAACGAGGTTACCTTTTGTATGGCCCCCCAGGTACTGGAAAATCAAGCTTGATTGCTGCAATGGCTAACCATCTCAAGTTTGACATATATGAC ATGGATTTGAGGGAGGTGCAGTGTAATTCGGATCTTAGAAGGTTGCTTATTGGGACGGGAAGCCGATCAATTTTGGTGATTGAGGACATCGATTGCTCAG TAAAATTGCACAACCGGGAAGTAAATAATAATGGTGAAGATGAAGATAAGGTAACTCACCCATATATATAAATTAATTATTCACATTGTATCAATTTTTA TTGAGTAAATGTATATTCACTAATATATTAATGATCAGTCAATATTCTATCAGCTTAGTGCACTCAAAATGGATGCACATAGTTTATATACAAGATTGTG GTACCATTGATGCAATGTAACACTTTGATGTTGAGTTCACTCGAATTTGTTTGATCCTATCAAGGTTACTCTGTCAGGATTGCTAAACTTCATTGATGGA TTGTGGTCAAGCTGTGGAGATGAACGAATCATAATATTTACAACAAATTACAAGGATCGTCTTGATCCGGCATTGTTGAGACCTGGTCGCATGGATATGC ACATTCATATGTCTTATTGCTCTTTCAGTGGTTTCAAGACATTGGCGGCTAACTACCTACGAATTCAGAACCATCCCCTGTTTGAGGACATAGAGGGACT GTTGCACAAGGTTAATGCAACGCCTGCTGAAGTTGCAGGAGAGCTGATGAAAAGTGACAATACAGACAGTGCCATCAAAGGGCTCATCAGCTTCCTTCAA TGCAAGCAGCCAGGCATAACAACACCTTAAAGTAAGGTGTTTTCCTTATTTTTGAGCCAGAGGCAGCACCTTTTCAGTGTTATAGTTAGTATATTGTTTT AAGAATATTTCTTAGGAACAAGAATAGTTTATGTTGGAGATGTGATTGGATTTTAATAAGGGTTCTCTTAACTTTAACTTTAGCCTAAGAACCGAGGACA AGGTATTAAAAGTGATAAAAAGATTATTGACTTATTAAGAGAGAAATGAAAACTTTCCCCAATAGAATTCATTCATATGAACAGGGCATTAATGAGATGT TTATTAGAAATTTATAATTTCTAATTAAGGTGGGCATCATATATTTAATACAATTGTATCCGCT
• Tissue: pods
• Gene name: LI_gene_134369;
• Additional information: details;

Expression of Ll_transcript_373690

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0
• PS2: 0.1
• PS3: 0
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_373690

• Blastp: Protein HYPER-SENSITIVITY-RELATED 4 from Arabidopsis with 48.49% of identity
• Blastx: Protein HYPER-SENSITIVITY-RELATED 4 from Arabidopsis with 46.56% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT3G50930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457304.1)
• Pfam: Domain associated at C-terminal with AAA (PF14363.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;