Ll_transcript_351778

Id TrinityTRINITY_DN42523_c0_g1_i3
Name TranscriptLl_transcript_351778
SequenceAATTTATTGATTGGGGAAAAAATGCACAAGAAGGTTCTATTTATCCAAATAATGTATTTCCCTCTCTGAAGAAACAAAATGAAGTAGCTCATCACTGCAC CAAACATGTCTCTTTTCAAATCATTCACTTCAAATTCTTCTGCTTTCAAACCCATGGAAACAACCATGGCTATGTTCATGCACATTTCTTCCTACAGGGT ACTCTCCCGTACTGTTTGTTCATCCTCCAGGAGAACTAGTTCTTCTGGCTTATTTAATTCCCGGGGAATATCGTCAGTTAAAGTGCTTTCTCTTTCAAAC ATGTCAAACTACTGTACTCATTCAAGGGATGAGATTTCTTCTTCAAAGCGAAGATCACGAGGGCCTGTTATGGCCGGAAAAAAGGCTGCAGAAGGAACAA AGCAAGAAGATGGTAAATACAAGCACACAGTCGATCTTCCCCAGACAAAATTCGGCATGAGAGCGAATTCTTCAGTAAGGGAGCCTGAAATTCAGAAAAT GTGGGAGGAGAATCAAGTATTTCAGAAAGTTGTTGACAAAAATAGTGGAGGAAATTTTGTTCTTCATGATGGCCCTCCATATGCTAATGGTGACCTTCAT ATTGGCCATGCCTTAAATAAAATTTTGAAGGATATCATAAATCGCTATAAGCTCCTTCAAAACTATAAAGTTTACTATGTGCCCGGATGGGATTGTCATG GCCTACCAATTGAATTAAAAGTTTTACAGTCACTGGATCAGGAGGCTAGAAAAAATCTCACACCATCGAAGTTGAGAACAAAGGCCGCTAAATTTGCCAA AGAAACTGTTAAAACTCAAATGTCATCTTTTAAGCGCTTTGGAATATGGGCAGACTGGAATAATCCGTATCTCACTCTAGATCCAGAATATGAAGCTGCC CAGATTGAAGTATTTGGCCAGATGGCCTTGAAAGGCTACATCTACAGAGGTAAAAAACCCGTACACTGGAGTCCCTCGTCACAAACAGCACTTGCTGAGG CTGAGTTGGAGTATCCTGAAGGGCATGTTTCGAGAAGCATATATGCCATTTTCAGAGTTGTCAGTGCTCCTCAAATGTCAAGTGACCTACTACAAGAATT TCCAAATTTATGCTTGGCCATATGGACTACAACTCCCTGGACTATTCCTGCAAATGGAGCTGTTGCGGTAAATATGAAGCTTGAATATGCTGTTGTTGAA GTAGAGCCATTAATAGAACATGTCTCGTCATCTGTCGAAACCAGAAAGAAAAGGCTTGGAAATGTTTTGAAGGATGAGAAGAAGCTGTTTCTTATTGTTG CTTCAGAACTTGTGCCAAAGTTAGAGGCGAAGTGGGGTGTGAAGCTTGTTGTCAAGAGAAAGCAGCTGGGTTCTGACTTGGAAAACTACAGATACATCCA TCCAATAGATAATGCGGAACGGCCAGTTGTAATTGGAGGAGATTATATTACGACAGAAGCAGGAACAGGACTGGTCCATACAGCTCCTGGACATGGTCAG GAGGATTATGTGACTGGTCAGAAGTATGGGCTACCGATAATTTGTCCGGTAGATGAGAACGGGATATTTACTGAAGAAGCCAGACAATTTAGTGGGCTTG ATGTTCTTGGTGAAGGTAACACTGCTGTTGTGAAATATTTGGATGAAAATTTGTCACTCATCATGGAAGAATCATATGAACACAAGTATCCATATGATTG GCGTACAAAAAAACCTACAATATTTAGAGCAACAGAGCAATGGTTTGCATCAGTAGAGGGATTTCGCGATGCTGCTATGGATGCTATTGGCCATGTAAAA TGGGTTCCACCTCAGGGAGAAAATAGAATCTCGGCAATGACTTCGAGTCGCTCTGATTGGTGTATATCACGACAAAGGACATGGGGTGTCCCTATTCCAG TTTTTTATCATCTGCCATCCAGAGAACCTCTCATGAATGAAGAGACAATTGACCATGTCAAATCTATTATATCCCAAAAGGGAAGTGATGCATGGTGGTA CTTGCCAGTAGAGGAACTTCTACCACCTAAATACCGTAATAAAGCAGCTGAATATGAAAAGGGAACTGACACAATGGATGTATGGTTTGATTCAGGTTCC TCTTGGGCTGCAGTCTTGGGTAAAAGAGGTCCCCTTAGCCTTCCTGCAGACTTGTATCTTGAAGGAACAGATCAACATCGAGGGTGGTTTCAGAGTTCAT TGTTAACCAGTATAGCCACACGAGGGAAGGCTCCATACTCTTGTGTTGTAACACATGGATTCGTATTGGACGAGAAGGGCTTAAAAATGAGCAAGTCTTT GGGTAATGTTGTGGATCCAAGAAGTGTCATTGAAGGAGGTAAAAATCAGAAGGAAGCACCTGCATATGGAGCTGATATTCTGCGACTCTGGGTTTCTAGT GTAGATTATACAGGTGATGTGATGATTGGCCCTCAGATTATTCGTCAAATGTCTGAGATTTACAGGAAGTTACGGGGAACTTTGAGATACCTCTTGGGAA ATCTTCATGATTGGAAAACAGATTATACTGTTCCATACCATGAACTTCCTAGGATTGATCAGCATGCACTATTTCAGCTTGAAAATGTTGTAAAAAACAT TCAAGTGAATTATGAAAGTTACCAGTTTTTCAAAATATTTCAGATTGTCATCCATCCATCTAGCTTTGGGACAATGACTCAAATATTTGCTAAGAGGAAC ACATGATTTAATAAAAATTGAAAATGATCA BLAST
Tissuepods
Gene nameLI_gene_134706; 
Additional informationdetails; 

Expression of Ll_transcript_351778

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_351778

BlastpIsoleucine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 77.15% of identity
BlastxIsoleucine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 77.15% of identity
Eggnogamino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) (By similarity)(COG0060)
KeggLink to kegg annotations (AT5G49030)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019439298.1)
PfamtRNA synthetases class I (I, L, M and V) (PF00133.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;