Ll_transcript_444033

• Id Trinity: TRINITY_DN42631_c0_g1_i2
• Name Transcript: Ll_transcript_444033
• Sequence: ATTTAATTCTCTTTATATTTGTAAAAGTTATTCACAGAGAAAGTTGATTATGGAGAGTGAACATTCCTCTGAAACAGATCTAGTTTTTCCATTGGTGGAA GGAGGGATTAAAATGAATATTTGCAAAACAATCCTTATAATCAAGAAATTTATCATCCCATCCTCCCATTTTTACTCACCATTATAATAAGCCTTCCCCA TTTCTCATAATAATGATAATCCCAGATCCTAAAATGGTTCAAACATCAAACCCTCCCCATGATCATGAAAATCAAGCACTGGTACTGAAATCAGCAACAT TTTCAAGGCTCATAGTGTTAACCCTAACTATCATATACCGTATTCTAGTTTCCCCTTACGACACCTCTGCGCCCATAAACCCTCCATGCCTCACACCCAA TAATAATAACACTCTTCCCCCTTTTCCCCGTGTCGCTTCCGCCATCGAAAACGGCGTCGTTTGGGACTCTGTCTATTTTATCCGCATTGCTCAGTGTGGC TATGAATATGAACAATTCTACGCCTTCTTACCACTCCTTCCTATTTCAATTTCATTCTTCTCTCGCACAGTTTTCGCAGTCTTTGTTCCCTTCATTGGTG ATAGAGCTGTTCTCGCTTTGTCTGGTTATGTTATCAACAATCTCGCTTTTGTCTTCGCAGCTCTGTACTTTTACAAACTTTCCACAGTTATCTTGAAGGA CCACGGAATAGCATTGCAGGCTACAATTTTGTTCTGCTTTAATCCTGCCTCTATATTTTATTCATCAATATACTCAGAGAGTTTATATTCTCTTCTTTCT TTTGGAGGAATGTACTACTTCGCATCTGGTGGAAGTAATTTATCTGTTCTTTTTCTGGCTCTCTCTGGTTGTGCGAGGTCTAATGGGGTGCTTAATGCTG GCTATCTCTGTTTTCAGACTATGCATCAGGCTTATGATGCTATGTTCCAGAAAAAGCGTGTTATTTTGGCATTGCAGGTTGTTATTGCTGGCGCTATACG AAGTGCATTTATTTTTGCTCCGTTTATAGCTTTTCAAGCTTATGGGTATTACAATATGTGTGTTGGACGATCTCCTGTTGAACTAAGGCCATGGTGCAAG GCCAGAGTACCATTGCTTTACAATTACATACAAAGTCATTATTGGGATGTAGGCTTCTTGAGATATTTTCAGCTTAAACAGTTGCCTAATTTTCTTCTTG CGACCCCAATACTGTCTCTGGCACTTTGTTCAGTTGTCCATTATGCTAAGTCGAGGCCTCAGATATTTTTCTCGCTGGGTTTCCAAACTTCTACTGAAGA AAAGAGCTGTGGAGTTGTGTTTTTGTCAGATGATCTCTCAAGGTCCAAAATAGATGGCACTGTGGAGAAATCCTCTGTCAAGGTAGAAGGAGAAATAAGG TGATGAAAGGGGATAAGGTTGAGGTTCCCATAGAACCTGAGCTAGCAGCCAGGCTAGGATACTTGTCTGCTTCGGTTCTCCCATTTGTATTACACTTGGT ATTCATGGCAGGCACTGCTTTCTTTGTCATGCATGTACAGGTTGCGACTCGTTTCTTATCTGCTAGCCCTCCTATCTATTGGTTTGCTTCATATATGATT AGACATCATGCAAAATGCTTTAGATGGGGATACATGATTTGGGCATACTCAGCAATTTATATTTTCCTGGGCAGCTTATTGTTTTCAAACTTCTATCCTT TTACTTGATCAGAAGATAGATGGTTTTCCTTGAAAACTCTCGGTCATTATTCTTCATGCATCAGTGCTGAGAGTCACAGTACAAAGTATTGCTGCTGACA TGCAGATTCTGTTGGCTGCTTACTTGCCTGGCCCATTTGGTGTTGACTAACAGGTTTGATTAAGTGGTTCTTTTCTCAGTTAGGCATGTAATTATAAAGG TTTGATAGCCCTCTCACAAGTGTATTTTATTCCTTAAGCTTTCATTTTCCCTTATTTATCTTCTAAAAATCATCTCACAAACATACCGTAGAGGATTAAC TTAAAGTCCAATTTTGTTGTAATCTTCCTCTTGTTTATTAGTTGTTTTATTTTTTTGAAGTCTAACGCCCCTTCATTTCCAATGAATAGATCTATGCTAT AAAACTATGTAATTTACTAATTTATGCTACAAAATGATGTATGTTACATGGTCCATGTATCATAAATTCAGCGATGCAATTATGGTACAATTTCAATTAA AAAA
• Tissue: pods
• Gene name: LI_gene_134853;
• Additional information: details;

Expression of Ll_transcript_444033

FPKM

• PAB: 0.4
• PNAB: 0.4
• PS1: 0.3
• PS2: 0.6
• PS3: 0.6
• PW1: 0.5
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_444033

• Blastp: GPI mannosyltransferase 2 from Rattus with 29.43% of identity
• Blastx: GPI mannosyltransferase 2 from Rattus with 28.61% of identity
• Eggnog: Phosphatidylinositol glycan anchor biosynthesis class V(COG5542)
• Kegg: Link to kegg annotations (366478)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445861.1)
• Pfam: Mannosyltransferase (PIG-V) (PF04188.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;