Ll_transcript_451716

• Id Trinity: TRINITY_DN42773_c0_g1_i5
• Name Transcript: Ll_transcript_451716
• Sequence: CAGAGTAGTAGCAGCGTCTTAAATGGATCTGTCTTTATAGCAACTGTACCTTCCACTCTCTCACTCTCTCACTCTCAAAACGTCACCGTTTTCTCTCCCC CTCTCTTCTCACCACCGTATCAATTTCATGAATCCACTATGCTGCATTGCTCCAGTTTCAATCGATCGTGACCGTACAACCCCCGTCGTCGCTAAACCCC TTCCGTTAGTTCTCGATTCCTCGATTCGAACCATTAGCTACGCTTCAAAATCGAGTTTATCAGCTCAAGATTCATCCATAGACGACGAGGATGATGTTGA TGCGAAGGTTAGTGGTGGCGGTGTTGCTGGAATTCTGTATAAATGGGTGAACTATGGTAAGGGATGGAGATCGAGGTGGTTTGTGCTGGAAGATGGTGTG CTTTCTTATTATAAGATTCATGGACCGGATAAGATCTTGGTGAAGGATCGGAGTATGAGAGTGATTGGTGATGAATCGGTGAGGTTTTTGAAGAAACCGA ATTGGAGTAGTGTGAATCGTGGTGGTAGTGTTAATAAGCAATGTAAACCGTTTGGTGAGATACACTTGAAGGTTTCTTCAATTCGTGCAAGCAAATCCGA TGATAAGCGACTTTCCATTTTTACTGGAACAAAAACTCTGCACCTGCGTTGTGTATCCAGAGATGACAGAGCCATGTGGATTGAGGCTCTACAGTCGGCA AAAGACCTTTTTCCTAGAGCTCTATCAAGTAGCGATCTTTCAACCTCAGAAGATATTGTAGTTTCAACAGAGAAGCTGCGTTCACGATTGTCACAGGAAG GCATAAGTGAAACTGTTATTAGTGACTGTGAGTCTATCATGCTCTCAGAAGTTTCTTATCTTCAAGGCAAGTTGAAGTTTCTTCATCAGAAGCATCATAT GTTGCTGAACACCTTAAAACAACTGGAGACAGAGAAAATAGAGCTGGAAACTACTGTGGTGGATGAAACAAAGGAACGCGAGTCGTATTGTGGACAAGCT AGAAGGTTTAGCGATTTCTATTCTGTAATGTCGGAGGGCAGTGCCACTGATTCTGTAGCAGATAATGAAAGCCAAGATGGAGCAGATGTTGAAACTGATG ATGAAGATGGAGCATATTTTGATACGAATGAGTTCCTGTCTTCAGATGCCTTAAGAAGTGCTTCCTATCGAAGTAGGGAAGGTACAGGAAATGCCAATAT ATACAATAAAGATTTTATTCTTTGTGATGGCTTATATGGGTTTGAGAAGGAGATCAAAGATGTAAGTTATCCATATGTTCAAAGAAGAGATAACTTACCA GAGCCGAAAGAGAAAGAGAAGCCTCTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGTGTTTGTCTCCCTGTTTATTTTAATG AACCACTCTCTTCATTGCAAAAGTGTTTCGAAGACCTGGAGTATTCATACCTTGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAG AATTCTAAATATTGCAGCTTTTGCTGTGTCTGGCTATGCATCAACTGAAGGTCGGCAGTGCAAACCTTTCAATCCCTTACTTGGAGAGACCTATGAAGCT GACTATCCAGATAAAGGGCTCAAGTTTTTTTCTGAAAAGGTTAGTCATCATCCGATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGTTGGAAGTTCTGGG CAGACTCCAATTTGAAAGGAAAATTCTGGGGGCGTTCTATTCAGTTAGATCCAGTGGGTGTCCTCACCCTACAATTTGAGGATGGTGAAACATTTCAGTG GAGCAAGGTCACCACTTCCATATACAATATCATACTAGGTAAAATTTATTGTGACCACTATGGTACCATGTGCATCAAGGGAAGTGGCAACTACTCCTGC AAACTGAAGTTCAAAGAGCAATCTATCATAGACCGAAACCCACATCAGGTCCATGGATTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAA TTGGGAAGTGGGATGAAGCAATGTATTATGTCCTTGGGGATCCAACTTCAAAGCCAAAAGGTTATGATCCAATGACAGAAGCTGCATTATTGTGGGAAAG GGGCAACTGTTCTACGAAGACAAGATACAACCTCTCTCCTTTTGCAATATCCTTAAATGAAATAGTGCCTGGCTTATCGGAGAAGTTGCCTCCAACCGAC TCAAGGTTGAGACCTGATCAAAGACATTTAGAAAATGGAGAGTATGAGCTGGCAAATGCAGAGAAACTAAGACTTGAACAGTTGCAGAGACAGGCAAGAA AGATGCAGGAAAGAGGATGGAAGCCGAGATGGTTTCAGAAGGACGAGGATGGTTCTTACCGATATAAAGGTGGCTACTGGGAAGCCCGCGAAAACAATAA CTGGGACGAAATCCCTGATATATTTGGACAGAGTTGTGATTTGCCTTCATGCTCTGAAGAGATTGTGTCCTAGAATGCTATCAAGTCCTGTGGTTTTCTC TCTTCACAACCCTCAAATATCTTCTTATGTTTTGCTAAATGTTAATTTGGATGTAGGTTATATAACTTATATAGATATAGAAAGATTCCTCTAGAAAGTG TTTGTCATCAATCTTCCAAGGTAAATTTATGCCAAATGCACATGTGGCCTTGTAGTAGTATATTAATTATATAGCTTCTTTTTTCTCCATTAGCAGCCAT GAATGGGTGAGAAAGAATTGATATTCATCTCAGTTTGTGAATGTGGTGATAATATTATTAGTTTAAAAATGCATCTTTCTGTTTCTGGTCACAGTGGATA TGGTTTTTCTTTCATATTTGATAGATGGGTATATGCTTGAGTATAATATCTTACCATGTAAAGATCTATACACATGCACCTTATCATCTGCCATCTATTT GAATTACTTTTTTTG
• Tissue: pods
• Gene name: LI_gene_135057;
• Additional information: details;

Expression of Ll_transcript_451716

FPKM

• PAB: 1.6
• PNAB: 26.4
• PS1: 34.3
• PS2: 22.5
• PS3: 32.6
• PW1: 21.1
• PW2: 21.4
• PW3: 15.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451716

• Blastp: Oxysterol-binding protein-related protein 1D from Arabidopsis with 74.22% of identity
• Blastx: Oxysterol-binding protein-related protein 1D from Arabidopsis with 72.98% of identity
• Eggnog: Oxysterol-binding protein(ENOG410XP9E)
• Kegg: Link to kegg annotations (AT1G13170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438335.1)
• Pfam: Pleckstrin homology domain (PF15413.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;