| Id Trinity | TRINITY_DN43121_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_495278 |
| Sequence | CTTTGGTATATCGTAAATTCATCGGATTTCACTATGACAAATATATCTTGCTTTTTGTTGTGAGGTTTGGGTTGAGGTGCAACATTGTGCGAAAGAGAGA GTATGGAGGATGGCATGCAATTGCAAGTCTCACTGGACAAGCTTCCCATCAAGCGTTTGGAATCCATCGAAGAAAATGGCCTCGAACGATTCCCTTCAGA TGCGGATTACGATGAGAAGAGGCTCTCACTGATAAGGCGAATTGATTTCGCTTGGGCTGTTGAGAAGGACGAAGAGAAGGAGGAGAAGAAGAAGCAAAAG AAGAGTTCAAAGGATACTTCTACACCATGGCAATGGCAGACCATGGTCGAGAATTTGCAGGCTGCTCATCAAGAACTCTCGGTCATTGTAGATCTCATCA ACACTGTGGAAGCAAACGATGCAGTAACTGTGGCTAGCATGACAAGGCCAAAACTATTACCGAATGAAGCTTTGTCTGACCTGGCTGTATCTGCAGCCAC CAAGCTGCAATGCTACTGTCATGTCGGGAAATACTTTAAGCAATCTGCCAAAGCTTTTGAACAGCAGGTTGCTCGGGAAGCCAGGTTCTATGGTGCTCTT ATCAGGTAAGTTTCCATTATTGACGTCTAAACATTAATACACATGAAATAACATTTTAAATCAATATTTTAGATCTTGAATTATGACATTCCATTGCATT CAAAAGCTGTCTTTTAAATAATCTGGTAAGTGGCTGTAATAATTTCATTAATGAATAAGGAAGGCCGTTGTAGGAAAATGCCTGTTTACTAGCTTACGTC ACCACCTATCGCATTTCCTAATAAGCGGACAGGTTGCAGCAAAATTGGAAAGTTAAACGGCTACGTCAGGCGGCTATAGCTCCAGGGAATGAGGGCTTCA CCTTCGATCTCTTTGATAACTCATATGACCAAGCAGCTATAGTCCGGTCATCGTCTATATCTACTGTTCGTGTCAATCATGATGCAGCTGGAATGCTGGC AATAGACATGTCTCCCAATTTATGCCACTCTCTCCAATTTGGTTTTGTCAGTGCACAATCAGATCATATGCAGATGAAATCCAATGAAAACAAATCCCAC TTTTCAGATGAGCATCATTTGGGAGACTCTGACAAAGAATCTTTAAGTGATGAAGAGTGCATTAAGAAAACACATTTGCTCCTTCGTGGGGCACATAAAG CAATTTTCAATGAGCAGGTGTTTGACCTGGTGAATCGTGAAGCATTTAACTCATCTGTGGGTGTCAGTGTGACTGGAATACAGGAAAACTATTTGCAGTT AAGCTTAGGTCAGGGAGTCTCTGTGTTCTTGTCACTTGTTTCTTCTGGTCAAGATCATTCCACAGTTGAAGGTGAACTCACCAATAATGGAGAAAATTCA ATTTTACCTTTGGAATCATCTGATGGAATGAGTCGTGATGCCAAACAAAACACCCTTAAGAAGAAAAGCCAGTTTTCTAATTCTACATGCTATGAGATTT ATATTCAACAGGTTTTTCATGAATATATATTTGGAAGAGGCTGTGAAAAGCCAATTTCCCCTGGCAATCGTTTATCTGGTGTACAGGCAAAGGACGGATC CAGTTTTCTTGGTCATTTTTTTATGTCTTTGGCTCATAGAATCTTTTCAAGAAAAGTTCTTTCAGAGCTGGAAAATGTGGTATTCAAGGTCCCATATCTG GAGCTAATTTCAAACCCTACATGGCATTCGCGATCGTCATCATGGACACTCTTCATGGAGGTTCCTCGGTCGATTCTCCATGGTCGCCAAATAAAAAATT CTGATTATGTGAAAAATGGTATCAAGCGTCAGTTTTGGACTAAGGTGGTCGTAAATGATGATTGCATCAATGTCAAAGCAGAAGGTTCGCCTAATGTGGC AGGCCTATTCAAGGGAAAGTCTGAGGAAACCCACTCAATAAACAGATATAACTGTAGCTTAGCTGATCTTCCTGTGATAATTTTGCAGCAGGTAAAACTA TGAAACTGAGAAAAAAAATTGATGTCACCGTAATTTTCTTATTCATATAGTGCACAATTGCATTTATGCAGTAGACTGAATAAAAACTTGTGATTTGTGT GAGCATTGCTTCAAATATTGTATGCTTATACATGCAACTAATATCATACAGGTTGTAAGCCAGATTATTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_135572; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495278
| Blastp | Mediator of RNA polymerase II transcription subunit 17 from Arabidopsis with 47.62% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 17 from Arabidopsis with 48.59% of identity |
| Eggnog | Subunit 17 of Mediator complex(ENOG410ZFCQ) |
| Kegg | Link to kegg annotations (AT5G20170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464238.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |