| Id Trinity | TRINITY_DN43131_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_495227 |
| Sequence | CTTCTCCACTTCACTCATTTACTCTCTCAATATTTATTACACTTTTACCAATGGCAGCATATTCCGCTGCCGAAGATGTAAAGTTTCAGAAAAAAGACGA CGTCGTTTACTTTAACGGCCAACCCGTCCACATGGCCATCCCGTTAACGGTGATCCGCTCCGTCACAAGTAATGGCGGTGCTCGCGTTGTTGCGCCGCCG CTGGTTGAAGTTAAGGAAGAGCCAAAGGAAGTAACCGATTCCGAAGTGGTAATAGAGACTCAGATGAAAAAGCCAAAAATAGAACACGAGTGTTTTGAAT TTAAAGACACTAGATCGCCGTCGTTTGATCGTTTTCTCGAGTTGAGTAACACGAAAGTTATGTCACACGACGAGTCCTTAAAATCAATTGTTCATGTGAA AGAAGAACGAAGCGAGTGCATTGAACCGGAAGAGAAGAAACCGGTTTTTTTCGAAGTGCGTGAGAAAGAAACGCCGTCGTTTTCAGAAGATTCTCTGAAA TCAACTGCAGCACAAGGAGTTGATTCTGATGCTGTTGAATCTAAGAGCAAGAGGTGTGGTGATGAAGAAGTTCAGATTCTTAAGGTGAATCCTTTTGCAG GTTTGAATCTGAAGAGGCATTCGAAGGCGAAGGTGGCTGAGGTGAAGAAGGAGAAGGTAGAAGTGAAGATTCTTAATTTGGAGGATGGCGAGTTTCCGAT CGAGCCAGGGTGGTTATTGATCGGAAGGAAAGTGGAACTCGCGCTCGCGACTGCGAAAGGAGTGAGGAAATTGGTTGATAATGAGATTGTTCACTTCAAT TTCACTCTTCCATACAAGTCCAAATCACAGTGGATTGTTCGCATTTCAACCAAGCGTTCTGGAGAGGTTGGAAGGCTTCCTATGGAATGGGCAAACACGG TTGTTCCACTTGTGCAGTCTGGAAAGGTTAAGGTTCAAGCGAGATGCATATCCGCCCCTTACAGCCTGCAAATGATGCAAGAAATCATGTTGCTAGTAAG TTTTTACACTCACCAATCTATACTCACACAAAGTGTTGATACCTCTTGGAATCTAGATGCTACAAACATTAACCCTACTATTTATCCACTGCTTACACTG TTCAAAATGCTAGAGATTAAGCCGTCTCAGAAGGCTGATTTCGCTCCTGAGGATATTGATTCTAGGAAGCGCTTGCTTAATCCAAAGCTTGATCCTGATG AGGTTGCAGCATTACCTTTAATTAAGAGAAGAAAGGGTGGTGACCAGCTATCAGAACAAAAAGATGATGATGAACAAGCTCTTTCAGAGTCTGCTTTGAA TAAGCTTGTTGGAGCTGCAGAAATCTATGAGCTGGAGGAGAAGGATGGCCCAAACACACTGACTTGTTGTCTGAAGCCTTACCAGAAACAAGCTCTCTAT TGGATGTCAGAAATTGAGAAGGGGATGAATGTTGAGAGGGATGCAGAAAATCTTCATCCTTGCTGGTCAGCCTACAATATATGTGATGGAAGGACAATTT ATGTGAACATCTTCACAGGGGAAGCTACAACAAGATTTCCAAGAGCAACTCAGATGGCAAGAGGAGGAATTCTGGCAGATGCAATGGGACTTGGAAAAAC TGTTATGACAATTGCTCTGATTCTTAGTAACCCAAGCAAGGGGAATGATGCAGAGAATGCAACTGATAACCTTGCTACAAATAAGAGGAATATGAACCCC ACATACAGAGTGAATGGTGGCACTCTTATTGTTTGTCCCATGGCGTTGCTAGGTCAGTGGAAGGATGAGCTTGAAACACATTCAAAGGCTGGTAGTATAA CAATATTTGTTCACTATGGTGGGGGTAGAACCAATAATCCCCAGCTGCTCTCAGAGCATGATGTTGTCTTAACTACATACGGAGTCCTACAATCTGCATT TAAAAGTGATGGAGTGAATAGCATTTACCACAGGGTCAATTGGTACAGGGTGGTGTTAGATGAAGCTCATCATATCAAAGGCCATAAATTACAGATTTCC CAGGCTGCTTTTGCTTTGTTGTCACACTGCCGCTGGTGTCTAACTGGAACCCCTATTCAGAATAGTTTAGAAGACTTATTCAGCCTCTTGTGCTTCTTGC GTGTTGAGCCTTGGTGCAACTGGGCATGGTGGCATAAGTTGATTCAAAGGCCCCATGAGAATAATGATCCAAGGGCCCTGAAATTGGTCAAGGGCATTTT GAGGACTATAATGTTAAGAAGAACTAAGGAAACAAAGGACAAAGAAGGAAGGCCCATACTAGTCCTGCCACCAACTAATATTCAATTAATCGAGTGTGAA CAGTCAGAATCTGAACGTGAATTCTATGATGCCCTCTTTATGAGATCTAAAGTAAGTTGTATCACCTAATTTGTAATTAGTTTTGAGCAAGTATTTCAAA TTTCTATATTTTTGTAAATGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_135588; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495227
| Blastp | DNA repair protein RAD5B from Arabidopsis with 61.01% of identity |
|---|---|
| Blastx | DNA repair protein RAD5B from Arabidopsis with 62.13% of identity |
| Eggnog | Transcription termination factor, RNA polymerase II(ENOG410XPDU) |
| Kegg | Link to kegg annotations (AT5G43530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449940.1) |
| Pfam | HIRAN domain (PF08797.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |