Ll_transcript_321421

• Id Trinity: TRINITY_DN43439_c0_g1_i1
• Name Transcript: Ll_transcript_321421
• Sequence: ATTTTCCTTCATCAGACCTGCGAAAAATAATACAAGACAGAAGGAAGCACTGAAAAACTAAGGTGCATGCTTATTTGAATATAAAGTGTCTATGTCAAAT TATGTATCATAAGACATGGTTTTCATTGAGAATCATAGCCAATTTATTCATAGTTTGTATGCAATTGTTACCAAGGGTCATTGGAACAATCTCCTTAAAG TGAAGAATGGTTCTGCACTCACTTCCACCACAATTCACCATATAACTTTGTACCTCTCACACTATGGTTATGGACCCACCCATTCCTTGGCATTCTTCAA ATGGGTTGAGTCCACCCCAAATTACAAACACTCCTTGCATTGTTCATGGGCCATGATTCATATACTCACAAAACACAAACACTTCAAAACTGCACAGCAC ATGCTTGACAAAATTGCCCACAGGGATTTTCTGTCATCACCTTCTGTTTTGAGCAGTTTGGTGAGGGGATATGATGACCCAGAATTTAATTCCCAGGTTT TGAGCTGGCTTGTGATACATTATGCAAAGTTGAGGATGACCCTTGATGCAATTCAGGTCTTTGAGCAGATGGGGTTGTTTAATGTGAGGCCTCATTTGCA TGCTTGTTCTGTGCTTTTGAATTGTTTAGTGAAGGATGGAGTTACTAATATGGTGTGGAAGGTTCACAAGAGAATGGTTCAACTTGGGGTTGTTGACAAT ATTCATATTTATAATTGTTTAGTTCATGCTTGTTCCAAATCAGGAGATGCGGAGAGGGTGGAAAAATTGTTAAGTGAGATGGAAGTGAAGGGTGTGGATC CTGATATTTTCACATACAATACTTTGATATCATTGTATTGCAAGAAAGGTATGCATTATGAGGCATTGTCCGTCCAGGATAAGATGGAAAGTGAAGGAAT TAGTCTTGATATTGTTAGTTACAATTCTCTTATTCATGGATTTTGCAAAGAGGGTAGGATGAGAGAAGCATTGAGGATGTTTAGAGATATCAAAAGTGCA ACTCCAAATCATGTGACATATACTACACTGATTGACGGATATTGTAAAACAAATGAACTTGAGCAAGCTCTGAAATTGCGTGAGGTGATGGAAGCTAAGG GATTGGACCCTGGAGTTGTTACTTATAATTCAATTTTGCGCAAGCTGTGTCAAGATGGCAGGATAAGGGATGCAAACAAACTCTTGAATGAGATGAGTGC AAGAAAAGTTCAAGCTGACAACATCACGTGTAACACATTGATTAATGCTTACTGCAAGATCGGAGATCTGGAATCTGCCTTTAAATTTAAAGAAAAGATG TCAGACGCTGGACTAAAGCCTGACCCGTTTACATACAAGGCATTGATTCATGGGTCATGCAAGGTGCGTGATCTGGAAAAGGCCAAGGAGTTATTGTTTA GCATGCTTGGTGCTGGGTTTTCCCCCAGTTACTGCACGTACTCATGGATTGTAGATGGCTACTGCAAGAAAGATAATGTAGCTGCAATTTTAACATTGCC AGATGATTTTCTGAGTAGAGGTCTTTGTCTCGATGTTTCAATATACAGGGCATTGATAAGAAGGTTGTGCAAGATAGAAAGGATTGAATATGCTGAAAAC TTATTCAATCAAATGGAAGGGAAGGAGATATCACCTGACAGTATTATCTATACCAGTCTTGCTTATGCTTATTTTAAAGCAGGGAAGTCAAGGGCGGCCT CAAATATGTTAGAAGAGATGGCTAGAAGGAGGTTGATGATAACAGCCAAAATCTATAGATGTTTTAGTGATGTTGATGATAGTGGAAACAAAGTGTCACA GATCTTCTGGGATCATGTGGTAGAGAGGGGTCTGATGTCGAGAAATACAATGAACAAAATACGGCAGATGGCGATGTGATGATGTTCTTGCTTATGAAAG ACTCCTCACAACTGGAAAATTCTTCTTTAGAACTTGTGGGAAATTCATTTCTTCTGTTTACCACAAGTTTTTTTCTTCATGTTTACACTTTTCATCAGAT TGGAAAATGATTGAGATTTTGGAATATATACGGTGGGGACTTTTTCAAAGGCCTGTGTCTTAACCATGTAAATCTTCTTATTTTGAAGCCTATTAATTCA TCTTTTCCGTCTTGATGACAAATATGACTCTTTAGTCTTCACTATGTGACTGGGAACACCGCTGTAGTGTTTCTGCCAAGTAGTTTATATTACAGAAAAA CCTTATCGGGTTCTCCTTTCCAGATTTTTTAGTTTATTAGGATGGAAGTGGAGGTACACATCTTCTATTTGTTTGTGGTTAAGCCAATATGATTGAGCAG GAG
• Tissue: pods
• Gene name: LI_gene_136052;
• Additional information: details;

Expression of Ll_transcript_321421

FPKM

• PAB: 0.1
• PNAB: 1.2
• PS1: 1
• PS2: 0.6
• PS3: 0.6
• PW1: 0.8
• PW2: 0.5
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_321421

• Blastp: Pentatricopeptide repeat-containing protein At5g38730 from Arabidopsis with 58.62% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g38730 from Arabidopsis with 58.62% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G38730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453492.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;