| Id Trinity | TRINITY_DN43570_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_395530 |
| Sequence | AAAAAGTATAAAGATACAGTACTTTTATCTTTTAAATATAATTATATAATATTATTATTCTAAGTGCAAAAACACGTATTTGTCTCTCAATTAATAGAGC GCATGCCGATTCTTATTCCTATATAAGACCATACCTCTCTAACTTGATTTTGTAAACTCCATACTTGCTTGTCCTCATTGTTACTGAGTGTAGTACATGT CCAAAATGGAGAGGAAAACTATGGCTTTGAAATTGTTTCTTGTAATGGCTGTGTTTCTATTATGCATGGCTAAAGTATCATCTTCTGATTCTAATGCCAA GATCCAAGACCATATCACTGATTCTAAGGTTGTAAAAGGACCCAATAGAAAGGCTTTGCCATTTGTTGATTGTGGAGCAAGTTGCAGGATAAGGTGCAGT TTGCATTCAAGACCAAATAGATGCAATAGAGCTTGTGGAACATGTTGTTCAAGGTGCAAGTGTGTTCCTCCAGGCACTTCAGGGAACAGAGAAATATGTG GTAGTTGTTACACTGACATGCTTACTCATGGTAACAGGTTCAAGTGTCCCTAGCTACACAAATCTATACAATATAATGTCATGTGTCTAGAATTGAGATC TGTCTCCAACGGTGTCTCATTTCCTGACTCGTCTCAACCCTTCTCTTATTCTTCCACCTTTCTCTATGCATTAATTAGTGGATGTATTTATGTCACCTTC TGTGTAACTGTGCCTATGAGTCAACTTTATGTGTAATTCATCACATGTTACTAAAATAAATAGGTACATTTATCCCTAATCAGTTTGTCTATGACTTGAA ATAACACTATTTTCATTTGATTTCAAGATGAGTTTATTTTTGTATGATATTTTTAAATATAAAAGATGGAAAGTAAGTCACATATAAATATGAGATATTG AAAATTTTAATAATATACTAAAATTCTTATTAGACAGAGATGAAAATATTCAACAGTTAAATTTTAAACATACTTTTTGTGATAAACCAGTCAGCATTAA GGAATAAATCGTTTTTGGAGAACTTTAACTGTGCTAAGTTGCTGTATAAGATAATTAATAATAAATTATAAATGATAGGAATAGTCATGTTAAAGCCAGT TTTTACTTATCCCGATGTTGATGTTGTTAATATTGTATTAGTCATTAAACCGGTTAAGACACATACTGGCATAGTAATTTAACTCTTCATATTATATTAT TACATGATTAGTACTTAGCAATTTGGTTAACATACC BLAST |
| Tissue | pods |
| Gene name | LI_gene_136260; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_395530
| Blastp | Snakin-2 from Solanum with 52.33% of identity |
|---|---|
| Blastx | Snakin-2 from Solanum with 52.33% of identity |
| Eggnog | gast1 protein homolog 1(ENOG410YWQ9) |
| Kegg | Link to kegg annotations (102582131) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420530.1) |
| Pfam | Gibberellin regulated protein (PF02704.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |