Ll_transcript_494960

• Id Trinity: TRINITY_DN43640_c0_g1_i3
• Name Transcript: Ll_transcript_494960
• Sequence: ATCAGAAAAAAATCACTAACGCCAGAATTTAGTTAAAAGTCTATTGTGGATAAGTAACACAGATTTTGAGTTGTCTGATTTTTCACATCTCAAACTCACA TTGAAGCTTCTTTGAACTCAGCACAACTCTGAAGCAAAGAAACTATGCCATCTCTATGCATCTTCACACCATTCCCATCACTTCAAAACCCTAACTTTCA CCATACCCATTTCTTCAATTCCCCTATAACTTCTCACCTTCACTTCTCCCTCACCAAAATCCACTTCCACAGGAAAATTCATTGCAACGCTTTGAAGGAT TCCAGTGAAGAGATAAAAGCTGTTTTGGGATCTGACGGTGGTGGTGGAGGTGACGGTGGTGACGGTGGTAATGATGGTGATGGTGACCGGAGTAAGAAGG TGGAGAAGAAAGATGGGTCTTTGCCAGATTGGTTGAATTTTACTTCTGATGATGCGAAAACGGTTTTTGCAGCGTTGGCGATTTCGCTTGCGTTTCGAAC GTTTGTGGCGGAGCCTAGGTATATTCCTTCCTTGTCAATGTATCCTACATTTGATGTTGGAGATCGACTTGTTGCTGAAAAGGTTTCGTACTACTTCAGA AAGCCATGTGCAAATGACATAGTGATATTTAAAAGCCCTCCAGTCCTTCAGGAAGTTGGATATACAAATGATGATGTTTTTATAAAGCGCGTGGTTGCGA AGGAAGGTGATGTTGTGGAGGTTCGCAAAGGGCATCTTATTGTTAATGGGGTTGAGAGAAATGAAAAGTTCATCTTTGAGGCACCTTCGTACGAGATGGA ACCTACACGTGTACCGGAGAACTATGTTTTTGTGATGGGAGACAACCGCAATAACAGCTATGATTCTCACGTGTGGGGTCCCCTTCCAGCCAAGAACATT ATAGGTAGGTCGGTGTTCCGCTATTGGCCGCCAAATAGAATTGCTAGCACAGTTTTGAAGGAAGGATGTGCTGTTGAAAGCAAGCAGGAGAGTACTCTAC CATCTCAATGACAATTCTTTATACAATGACACCAATTGAATGGATCTTTATTATGGATGGTATCAATTTTCATATCATCCCATCCTAATGTTCATTGTGC TGTGGAATTTTTTCAAGTTCTTCCTCACTCTTGGTATTAGCTAATGTAAGTAATGATCAACCTTGAGGATTAAGATGAATCAGGTACTATAGGGAGGAGG GTGGTGCACCCCCTAATGGAAGGTGTTGTAGAAAATATGCACTGTGCTCATTGAATTTTAGCTGATATAATTTGTAGTCTGATTCTGAATTCATATAAAG ATCCGTTGTATTATGTGTTAATTCTTCAAATTTGTTATTTTTATTTTAATCTCTACTATCATGGGC
• Tissue: pods
• Gene name: LI_gene_136372;
• Additional information: details;

Expression of Ll_transcript_494960

FPKM

• PAB: 130.1
• PNAB: 54.3
• PS1: 27.6
• PS2: 21.9
• PS3: 28.3
• PW1: 39
• PW2: 26.6
• PW3: 19

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494960

• Blastp: Chloroplast processing peptidase from Arabidopsis with 65.93% of identity
• Blastx: Chloroplast processing peptidase from Arabidopsis with 65.93% of identity
• Eggnog: Signal peptidase i(COG0681)
• Kegg: Link to kegg annotations (AT3G24590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422133.1)
• Pfam: Peptidase S24-like (PF00717.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;