Ll_transcript_504069

Id TrinityTRINITY_DN44085_c0_g1_i3
Name TranscriptLl_transcript_504069
SequenceAAAAAAATGGTCTAACTTATTATTACACGTGACATAACATTCGGAATTGAAAACCCAAAAACAAAGAAACAGATCAGAGAGATAATTGGTTTTGGTTCGA AGGGATCACAGAGTAACCGAATTGAATCAAAATGTTCCATCAATTTGGAGCGACGGCGGAGTCTCTGAGCAAGGCGTCGACGGCGGTGTTTCGGATCGGC ACCGACGCGCACCTCTACGACGATCCTGAAGACGTGAACATAGCTCCTCTCCTCGACAGCAAATTCGATTCCGAGAAATGTGAAGCTCTCAAACGCTTAC TCGCTCTCATCGCTCAAGGCTTCGATGTTTCCAATTTCTTCCCTCAGGTTGTTAAAAATGTTGCGTCTCAATCATTGGAAGTTAAGAAGCTGGCTTACTT GTACCTCCTGCATTATGCTGAAAAGCATCCAAATGAAGTGTTGCTATCCATTAATTGTTTCCAAAAGGACCTGGGAGACACAAATCCATTGGTGAGGGCA TGGGCGCTTCGTGCCATGGCGGGAATCCGCCTTCATGTAATTGCGCCTCTTGTCATAGTTGCTGTTGGAAAATGTGCTAGAGATCCTTCTGTCTATGTTA GAAAATGTGCTGCTAATGCTCTTCCTAAACTTCATGATTTGCGGATGGAGGAACATACTTCTGCAATTGAAGAGATTGTTGGACTATTGTTAAATGACCA TTCCCCAGGAGTTGTTGGAGCTGCTGCTTCTGCATTTACCTCTGTTTGCCCGAACAATTTTTCATTGATTGGAAGAAATTACAGAAGGTTGTGTGAGATT CTTCCTGATGTGGAAGAGTGGGGTCAAATAATTCTAATCGGAATCCTTCTGCGGTATGTGATAGCGAGGCATGGGCTTGTCAAAGAATCGATCATGTGTT CTTTTTATAATAAAGATGATGGCAATGTGGTGAAAGATGAACCAGACATTGTTTTTAAAAAAAATTCTAGTTATGCCAATGAGGAGGCTGTATCTGAATT AGCAAATATGATATTTCAGTGTTACATTGAAGGGCCAGATGAGTACTTATCACGGTCAAGTTCTACAAATAGGGTTGCTCCTAAATTAGATGTATCACAA TTTACATCTTGCAGTAATGATGTTGTGAAGATCCTGCTGCAGTGCACATCACCATTGTTATGGTGTAATAACAGTGCAGTTGTACTTGCAGCTGCTGGAG TACATTGGATAATGGCTTCTAAGGGGAATGTTGAAACAATTGTTAAACCACTCTTGTTTATAATGCGATCATCATATGCCTCAAGATATGTGGTATTATG CAATATCCAAGTGTTTGCTAAAGCTATGCCATCTCTCTTCACTCCACACTATCAAGACTTCTTCATATGTTCTTCAGATTCCTATCAGATAAAAGCGCTG AAACTGGAGATACTTTCTTCTATTGCTACAGATTCATCTTTTCCATACATTCTGAAAGAGTTTCAGGATTATATTAGAGATTCCGACCGGAGATTTGTTG CTGATACAGTTGCTGCCTTAGGACTATGTGCCCAGCGACTTCCCAAAATGGCAACTACATGCTTGGAAGGATTGTTGGCTCTGATTAGACAGGAACTTTC GTGTGGTGAAATCAGATCTGTGGATGGAGAAGAGACAGTGCTAATTCAGGCAATTATGTCCATCAAGTCAATTGTACAATTAGAACCCCCCAGTCATGAG AAGGTTATAATTCAGTTGATCCGTAGTTTGGATATAATCAAGGTTCCTGCTGCCCGTGCAATGATTATTTGGATGTTGGGGGAGTATTGCTCTTTGGGTG AGTTAATTCCAAGGATGTTGAGTACGGTGCTAAAGTATCTTGCTTGGTGTTTTCCTTCAGAAGCAATAGAAACCAAGCTTCAGATTCTTAATACAACTGC AAAGGTCTTACTATGCATTAAGGGAGAAGATATTTGGACCCTGAGAAAAGTCTGGAGTTATGTAATTGAACTGGCTGAGTGCGATCTGAACTACGATGTC CGTGATCGTTCGCGTTTCTTAAAGAAACTTCTCTCAAGCAATTTGGAGCCTCAAAATTTGGAAGAAGAAAACAGTGAATCACAAAGAAGAGACCAGTCCT ATGTACTTGCAGAATGCATATTTGGTAGACAAATAAAAGCTGTGACAGTGTCATCTGAACCCATCAATTACCGGTTTTATCTCCCCGGGTCTCTTTCGCA GTTAGTATTCCATGCAGCTCCAGGATATGAACCTCTCCCAAAACCTTGTAGTCTTCCATATATTGATCTTGATCAGCGTGATGGAGCTTCTGAGGGTGAT TCAGATGAGGAGGATGGTTCTGGCACATCTGGATCATTGGATGAGGAAAGTGCTTCTGATTATAGCTCTGAACAGTCAATTACTGGTTCAAGTGAAGACA GTGGCAGTAACGAGAATGTTTCTGGCAATGAAGGTGGCAACCATGCAGATCCATTGATTCAGATTTCAGACATTGGCAATGTCTATGATAACCAGAATGG TGGGGCTCATTCTAGCACAGCCGATTTTGGGGACTTGATGTCAACTAAGTCTCTTGAGTCTTGGTTGGATGAGGCACCCACATCATCAAACGAAACTGGA ACAGAGCAAAACCGAGTTCATAGATCTTCAGCGAGAATAACAATCAGAAATATCGAAAGCCGAGTTAAACCCAAATGCTACACACTTTTAGATCCTACAA ATGGAAATGGGTTAAAGGTGAATTATTCATTTTCATCTGAGGCTTCGAGCATTGCCTCCCATCTTATATGTCTAGAACTATACTTCGAAAATTTTTCATC GGAGCCCATGTTTGATATAATCTTAATAGATGAGAATTCTAGTAAAAGCTCAGATTCTATGGACCAAATATCTCCGACATCTGAAAATACCTTGAAAATC CATACTGATAAACCAGCATTGGTTTCCATGGAGGAGATCCCTTCTCTGGAGCCTGGCCAGACAGCAAACCGGACTGTACTCGTTCGCTTCCATCACCACC TTTTGCCTCTGAAACTGGCTATATTTTGCAATGACAAAACATTCCCTGTTAAGTTACGACCTGACATTGGATACTTTGTAAAACCACTTTCGATCAGTAT TGAAGCTTTCAGAGATAAGGAATCTCACCTTTGCGGGATGTTTGAATATGTGAGGAGTTGCGCCTTCACTGATCACATTCAAGAGCTGAACAAGGGAACT AACTCTTTGACAGAGGACAAATTTCTTGTGATCTGTGAAAGCTTAGCACTTAAGATGCTGAGCAATGCAAATCTTTCTCTTGTATCTGTGGATATGCCGG TCGCTTCCAACCTTGATGATGCTTCTGGTTTGTGCTTGCGTTTCAGCAGTGAGATCTTGAGCAACTCCATACCATGTTTAATTACAGTTACTGTTGAAGG TAAATGCTCCGACCCATTGACTGTTTCTGCAAAAGTCAACTGTGAAGAGACTGTATTTGGCTTAAATTTCTTAAATAGGGTTGTCAATTTCTTGGTGGAA CCATCTGTTACCCACTCATAAGTTTTGATATTGTATAGAAGATTCATAAATATTATTCATTTATGAGATGATATATTGGAAAAACTTGAAGTGCAATCGT TTTGGTTTTGGATGTATTTTAGGCTATGGTGAGTTATTGGAGTTATGGTTTTCCATTTTTTAATCTGTTGGGAAGGATGAAAATGGAGGGAGGTTTTGTA ATTCAACCTTGTATGACTGTAATCTCTAATTTTCCATAGATTTTCATGTCTTCTTTTCAATTCTCATTGAGTGTGGTTATGGTTTCTGGTGAAATGGAGC TTTCTAATTTAGTTTCTGATTCAGTTGTAAGCAAAACACAACTATTGTATGAGGAATTTATACTGAACCTTTTCTGAGAAGCATATTTTGTATTTTACTG AATTTTGATGTGAGATAAAAGAGTTGCTATGTTCATAAGCCTTCACTTTTATGGAGTTGCTATGGTCCCCTCTACCTAAATGTTTGATGCC BLAST
Tissuepods
Gene nameLI_gene_137072; 
Additional informationdetails; 

Expression of Ll_transcript_504069

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_504069

BlastpAP3-complex subunit beta-A from Arabidopsis with 58.04% of identity
BlastxAP3-complex subunit beta-A from Arabidopsis with 56.89% of identity
EggnogThe coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
KeggLink to kegg annotations (AT3G55480)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432911.1)
PfamAdaptin N terminal region (PF01602.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;