Ll_transcript_504071

Id TrinityTRINITY_DN44085_c0_g1_i5
Name TranscriptLl_transcript_504071
SequenceAAAAAAATGGTCTAACTTATTATTACACGTGACATAACATTCGGAATTGAAAACCCAAAAACAAAGAAACAGATCAGAGAGATAATTGGTTTTGGTTCGA AGGGATCACAGAGTAACCGAATTGAATCAAAATGTTCCATCAATTTGGAGCGACGGCGGAGTCTCTGAGCAAGGCGTCGACGGCGGTGTTTCGGATCGGC ACCGACGCGCACCTCTACGACGATCCTGAAGACGTGAACATAGCTCCTCTCCTCGACAGCAAATTCGATTCCGAGAAATGTGAAGCTCTCAAACGCTTAC TCGCTCTCATCGCTCAAGGCTTCGATGTTTCCAATTTCTTCCCTCAGGTTGTTAAAAATGTTGCGTCTCAATCATTGGAAGTTAAGAAGCTGGCTTACTT GTACCTCCTGCATTATGCTGAAAAGCATCCAAATGAAGTGTTGCTATCCATTAATTGTTTCCAAAAGGACCTGGGAGACACAAATCCATTGGTGAGGGCA TGGGCGCTTCGTGCCATGGCGGGAATCCGCCTTCATGTAATTGCGCCTCTTGTCATAGTTGCTGTTGGAAAATGTGCTAGAGATCCTTCTGTCTATGTTA GAAAATGTGCTGCTAATGCTCTTCCTAAACTTCATGATTTGCGGATGGAGGAACATACTTCTGCAATTGAAGAGGTCCATCTGTTTTGTTCTGCTTATCA TAGATTTTCCTTCACATGTACTAGTACCTTGACTACATTCAGCTTAACCTAGTTGGCAGAATAACTTGAAGAGAAAAATGACTTATTTTCTGCAGGGTTT TCTTGGGGCATATACTTTTGAACTAAGAGTTATTTATAGAAAGTTTTGTGCCAGAGATTTGACTTCATTAATGTGTGGTTGCAAGTCTATTTGCAGGTTC AGCTCATAAACTTTGATTCTTCATATGGTGCAGATTGTTGGACTATTGTTAAATGACCATTCCCCAGGAGTTGTTGGAGCTGCTGCTTCTGCATTTACCT CTGTTTGCCCGAACAATTTTTCATTGATTGGAAGAAATTACAGAAGGTTGTGTGAGATTCTTCCTGATGTGGAAGAGTGGGGTCAAATAATTCTAATCGG AATCCTTCTGCGGTATGTGATAGCGAGGCATGGGCTTGTCAAAGAATCGATCATGTGTTCTTTTTATAATAAAGATGATGGCAATGTGGTGAAAGATGAA CCAGACATTGTTTTTAAAAAAAATTCTAGTTATGCCAATGAGGAGGCTGTATCTGAATTAGCAAATATGATATTTCAGTGTTACATTGAAGGGCCAGATG AGTACTTATCACGGTCAAGTTCTACAAATAGGGTTGCTCCTAAATTAGATGTATCACAATTTACATCTTGCAGTAATGATGTTGTGAAGATCCTGCTGCA GTGCACATCACCATTGTTATGGTGTAATAACAGTGCAGTTGTACTTGCAGCTGCTGGAGTACATTGGATAATGGCTTCTAAGGGGAATGTTGAAACAATT GTTAAACCACTCTTGTTTATAATGCGATCATCATATGCCTCAAGATATGTGGTATTATGCAATATCCAAGTGTTTGCTAAAGCTATGCCATCTCTCTTCA CTCCACACTATCAAGACTTCTTCATATGTTCTTCAGATTCCTATCAGATAAAAGCGCTGAAACTGGAGATACTTTCTTCTATTGCTACAGATTCATCTTT TCCATACATTCTGAAAGAGTTTCAGGATTATATTAGAGATTCCGACCGGAGATTTGTTGCTGATACAGTTGCTGCCTTAGGACTATGTGCCCAGCGACTT CCCAAAATGGCAACTACATGCTTGGAAGGATTGTTGGCTCTGATTAGACAGGAACTTTCGTGTGGTGAAATCAGATCTGTGGATGGAGAAGAGACAGTGC TAATTCAGGCAATTATGTCCATCAAGTCAATTGTACAATTAGAACCCCCCAGTCATGAGAAGGTTATAATTCAGTTGATCCGTAGTTTGGATATAATCAA GGTTCCTGCTGCCCGTGCAATGATTATTTGGATGTTGGGGGAGTATTGCTCTTTGGGTGAGTTAATTCCAAGGATGTTGAGTACGGTGCTAAAGTATCTT GCTTGGTGTTTTCCTTCAGAAGCAATAGAAACCAAGCTTCAGATTCTTAATACAACTGCAAAGGTCTTACTATGCATTAAGGGAGAAGATATTTGGACCC TGAGAAAAGTCTGGAGTTATGTAATTGAACTGGCTGAGTGCGATCTGAACTACGATGTCCGTGATCGTTCGCGTTTCTTAAAGAAACTTCTCTCAAGCAA TTTGGAGCCTCAAAATTTGGAAGAAGAAAACAGTGAATCACAAAGAAGAGACCAGTCCTATGTACTTGCAGAATGCATATTTGGTAGACAAATAAAAGCT GTGACAGTGTCATCTGAACCCATCAATTACCGGTTTTATCTCCCCGGGTCTCTTTCGCAGTTAGTATTCCATGCAGCTCCAGGATATGAACCTCTCCCAA AACCTTGTAGTCTTCCATATATTGATCTTGATCAGCGTGATGGAGCTTCTGAGGGTGATTCAGATGAGGAGGATGGTTCTGGCACATCTGGATCATTGGA TGAGGAAAGTGCTTCTGATTATAGCTCTGAACAGTCAATTACTGGTTCAAGTGAAGACAGTGGCAGTAACGAGAATGTTTCTGGCAATGAAGGTGGCAAC CATGCAGATCCATTGATTCAGATTTCAGACATTGGCAATGTCTATGATAACCAGAATGGTGGGGCTCATTCTAGCACAGCCGATTTTGGGGACTTGATGT CAACTAAGTCTCTTGAGTCTTGGTTGGATGAGGCACCCACATCATCAAACGAAACTGGAACAGAGCAAAACCGAGTTCATAGATCTTCAGCGAGAATAAC AATCAGAAATATCGAAAGCCGAGTTAAACCCAAATGCTACACACTTTTAGATCCTACAAATGGAAATGGGTTAAAGGTGAATTATTCATTTTCATCTGAG GCTTCGAGCATTGCCTCCCATCTTATATGTCTAGAACTATACTTCGAAAATTTTTCATCGGAGCCCATGTTTGATATAATCTTAATAGATGAGAATTCTA GTAAAAGCTCAGATTCTATGGACCAAATATCTCCGACATCTGAAAATACCTTGAAAATCCATACTGATAAACCAGCATTGGTTTCCATGGAGGAGATCCC TTCTCTGGAGCCTGGCCAGACAGCAAACCGGACTGTACTCGTTCGCTTCCATCACCACCTTTTGCCTCTGAAACTGGCTATATTTTGCAATGACAAAACA TTCCCTGTTAAGTTACGACCTGACATTGGATACTTTGTAAAACCACTTTCGATCAGTATTGAAGCTTTCAGAGATAAGGAATCTCACCTTTGCGGGATGT TTGAATATGTGAGGAGTTGCGCCTTCACTGATCACATTCAAGAGCTGAACAAGGGAACTAACTCTTTGACAGAGGACAAATTTCTTGTGATCTGTGAAAG CTTAGCACTTAAGATGCTGAGCAATGCAAATCTTTCTCTTGTATCTGTGGATATGCCGGTCGCTTCCAACCTTGATGATGCTTCTGGTTTGTGCTTGCGT TTCAGCAGTGAGATCTTGAGCAACTCCATACCATGTTTAATTACAGTTACTGTTGAAGGTAAATGCTCCGACCCATTGACTGTTTCTGCAAAAGTCAACT GTGAAGAGACTGTATTTGGCTTAAATTTCTTAAATAGGGTTGTCAATTTCTTGGTGGAACCATCTGTTACCCACTCATAAGTTTTGATATTGTATAGAAG ATTCATAAATATTATTCATTTATGAGATGATATATTGGAAAAACTTGAAGTGCAATCGTTTTGGTTTTGGATGTATTTTAGGCTATGGTGAGTTATTGGA GTTATGGTTTTCCATTTTTTAATCTGTTGGGAAGGATGAAAATGGAGGGAGGTTTTGTAATTCAACCTTGTATGACTGTAATCTCTAATTTTCCATAGAT TTTCATGTCTTCTTTTCAATTCTCATTGAGTGTGGTTATGGTTTCTGGTGAAATGGAGCTTTCTAATTTAGTTTCTGATTCAGTTGTAAGCAAAACACAA CTATTGTATGAGGAATTTATACTGAACCTTTTCTGAGAAGCATATTTTGTATTTTACTGAATTTTGATGTGAGATAAAAGAGTTGCTATGTTCATAAGCC TTCACTTTTATGGAGTTGCTATGGTCCCCTCTACCTAAATGTTTGATGCC BLAST
Tissuepods
Gene nameLI_gene_137072; 
Additional informationdetails; 

Expression of Ll_transcript_504071

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_504071

BlastpAP3-complex subunit beta-A from Arabidopsis with 56.49% of identity
BlastxAP3-complex subunit beta-A from Arabidopsis with 54.24% of identity
EggnogThe coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
KeggLink to kegg annotations (AT3G55480)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432911.1)
PfamAdaptin N terminal region (PF01602.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;