Ll_transcript_504072

Id TrinityTRINITY_DN44085_c0_g1_i6
Name TranscriptLl_transcript_504072
SequenceAAAAAAATGGTCTAACTTATTATTACACGTGACATAACATTCGGAATTGAAAACCCAAAAACAAAGAAACAGATCAGAGAGATAATTGGTTTTGGTTCGA AGGGATCACAGAGTAACCGAATTGAATCAAAATGTTCCATCAATTTGGAGCGACGGCGGAGTCTCTGAGCAAGGCGTCGACGGCGGTGTTTCGGATCGGC ACCGACGCGCACCTCTACGACGATCCTGAAGACGTGAACATAGCTCCTCTCCTCGACAGCAAATTCGATTCCGAGAAATGTGAAGCTCTCAAACGCTTAC TCGCTCTCATCGCTCAAGGCTTCGATGTTTCCAATTTCTTCCCTCAGGTTGTTAAAAATGTTGCGTCTCAATCATTGGAAGTTAAGAAGCTGGCTTACTT GTACCTCCTGCATTATGCTGAAAAGCATCCAAATGAAGTGTTGCTATCCATTAATTGTTTCCAAAAGGACCTGGGAGACACAAATCCATTGGTGAGGGCA TGGGCGCTTCGTGCCATGGCGGGAATCCGCCTTCATGTAATTGCGCCTCTTGTCATAGTTGCTGTTGGAAAATGTGCTAGAGATCCTTCTGTCTATGTTA GAAAATGTGCTGCTAATGCTCTTCCTAAACTTCATGATTTGCGGATGGAGGAACATACTTCTGCAATTGAAGAGGTCCATCTGTTTTGTTCTGCTTATCA TAGATTTTCCTTCACATGTACTAGTACCTTGACTACATTCAGCTTAACCTAGTTGGCAGAATAACTTGAAGAGAAAAATGACTTATTTTCTGCAGGGTTT TCTTGGGGCATATACTTTTGAACTAAGAGTTATTTATAGAAAGTTTTGTGCCAGAGATTTGACTTCATTAATGTGTGGTTGCAAGTCTATTTGCAGGTTC AGCTCATAAACTTTGATTCTTCATATGGTGCAGATTGTTGGACTATTGTTAAATGACCATTCCCCAGGAGTTGTTGGAGCTGCTGCTTCTGCATTTACCT CTGTTTGCCCGAACAATTTTTCATTGATTGGAAGAAATTACAGAAGGTTGTGTGAGATTCTTCCTGATGTGGAAGAGTGGGGTCAAATAATTCTAATCGG AATCCTTCTGCGGTATGTGATAGCGAGGCATGGGCTTGTCAAAGAATCGATCATGTGTTCTTTTTATAATAAAGATGATGGCAATGTGGTGAAAGATGAA CCAGACATTGTTTTTAAAAAAAATTCTAGTTATGCCAATGAGGAGGCTGTATCTGAATTAGCAAATATGATATTTCAGTGTTACATTGAAGGGCCAGATG AGTACTTATCACGGTCAAGTTCTACAAATAGGGTTGCTCCTAAATTAGATGTATCACAATTTACATCTTGCAGTAATGATGTTGTGAAGATCCTGCTGCA GTGCACATCACCATTGTTATGGTGTAATAACAGTGCAGTTGTACTTGCAGCTGCTGGAGTACATTGGATAATGGCTTCTAAGGGGAATGTTGAAACAATT GTTAAACCACTCTTGTTTATAATGCGATCATCATATGCCTCAAGATATGTGGTATTATGCAATATCCAAGTGTTTGCTAAAGCTATGCCATCTCTCTTCA CTCCACACTATCAAGACTTCTTCATATGTTCTTCAGATTCCTATCAGATAAAAGCGCTGAAACTGGAGATACTTTCTTCTATTGCTACAGATTCATCTTT TCCATACATTCTGAAAGAGTTTCAGGATTATATTAGAGATTCCGACCGGAGATTTGTTGCTGATACAGTTGCTGCCTTAGGACTATGTGCCCAGCGACTT CCCAAAATGGCAACTACATGCTTGGAAGGATTGTTGGCTCTGATTAGACAGGAACTTTCGTGTGGTGAAATCAGATCTGTGGATGGAGAAGAGACAGTGC TAATTCAGGCAATTATGTCCATCAAGTCAATTGTACAATTAGAACCCCCCAGTCATGAGAAGGTATTATTCTGATTCCTTTTCATATAAAAGCATCTCCT ATGGTGTTCTTGTTTTTTGTATTGAACTAAAAATAATTTCAAAAGACAATGTGGAGATATGGAACAAACTAACCTCAAGATCGGACTGCATAGTAGTTGA GTCAGTACTTGCAATTTTTTGGTAGTTGCCTGTGAAGTTTTGACTGACCTCTAGTCTTTCCCAATGTTAAAAAGGTTATAATTCAGTTGATCCGTAGTTT GGATATAATCAAGGTTCCTGCTGCCCGTGCAATGATTATTTGGATGTTGGGGGAGTATTGCTCTTTGGGTGAGTTAATTCCAAGGATGTTGAGTACGGTG CTAAAGTATCTTGCTTGGTGTTTTCCTTCAGAAGCAATAGAAACCAAGCTTCAGATTCTTAATACAACTGCAAAGGTCTTACTATGCATTAAGGGAGAAG ATATTTGGACCCTGAGAAAAGTCTGGAGTTATGTAATTGAACTGGCTGAGTGCGATCTGAACTACGATGTCCGTGATCGTTCGCGTTTCTTAAAGAAACT TCTCTCAAGCAATTTGGAGCCTCAAAATTTGGAAGAAGAAAACAGTGAATCACAAAGAAGAGACCAGTCCTATGTACTTGCAGAATGCATATTTGGTAGA CAAATAAAAGCTGTGACAGTGTCATCTGAACCCATCAATTACCGGTTTTATCTCCCCGGGTCTCTTTCGCAGTTAGTATTCCATGCAGCTCCAGGATATG AACCTCTCCCAAAACCTTGTAGTCTTCCATATATTGATCTTGATCAGCGTGATGGAGCTTCTGAGGGTGATTCAGATGAGGAGGATGGTTCTGGCACATC TGGATCATTGGATGAGGAAAGTGCTTCTGATTATAGCTCTGAACAGTCAATTACTGGTTCAAGTGAAGACAGTGGCAGTAACGAGAATGTTTCTGGCAAT GAAGGTGGCAACCATGCAGATCCATTGATTCAGATTTCAGACATTGGCAATGTCTATGATAACCAGAATGGTGGGGCTCATTCTAGCACAGCCGATTTTG GGGACTTGATGTCAACTAAGTCTCTTGAGTCTTGGTTGGATGAGGCACCCACATCATCAAACGAAACTGGAACAGAGCAAAACCGAGTTCATAGATCTTC AGCGAGAATAACAATCAGAAATATCGAAAGCCGAGTTAAACCCAAATGCTACACACTTTTAGATCCTACAAATGGAAATGGGTTAAAGGTGAATTATTCA TTTTCATCTGAGGCTTCGAGCATTGCCTCCCATCTTATATGTCTAGAACTATACTTCGAAAATTTTTCATCGGAGCCCATGTTTGATATAATCTTAATAG ATGAGAATTCTAGTAAAAGCTCAGATTCTATGGACCAAATATCTCCGACATCTGAAAATACCTTGAAAATCCATACTGATAAACCAGCATTGGTTTCCAT GGAGGAGATCCCTTCTCTGGAGCCTGGCCAGACAGCAAACCGGACTGTACTCGTTCGCTTCCATCACCACCTTTTGCCTCTGAAACTGGCTATATTTTGC AATGACAAAACATTCCCTGTTAAGTTACGACCTGACATTGGATACTTTGTAAAACCACTTTCGATCAGTATTGAAGCTTTCAGAGATAAGGAATCTCACC TTTGCGGGATGTTTGAATATGTGAGGAGTTGCGCCTTCACTGATCACATTCAAGAGCTGAACAAGGGAACTAACTCTTTGACAGAGGACAAATTTCTTGT GATCTGTGAAAGCTTAGCACTTAAGATGCTGAGCAATGCAAATCTTTCTCTTGTATCTGTGGATATGCCGGTCGCTTCCAACCTTGATGATGCTTCTGGT TTGTGCTTGCGTTTCAGCAGTGAGATCTTGAGCAACTCCATACCATGTTTAATTACAGTTACTGTTGAAGGTAAATGCTCCGACCCATTGACTGTTTCTG CAAAAGTCAACTGTGAAGAGACTGTATTTGGCTTAAATTTCTTAAATAGGGTTGTCAATTTCTTGGTGGAACCATCTGTTACCCACTCATAAGTTTTGAT ATTGTATAGAAGATTCATAAATATTATTCATTTATGAGATGATATATTGGAAAAACTTGAAGTGCAATCGTTTTGGTTTTGGATGTATTTTAGGCTATGG TGAGTTATTGGAGTTATGGTTTTCCATTTTTTAATCTGTTGGGAAGGATGAAAATGGAGGGAGGTTTTGTAATTCAACCTTGTATGACTGTAATCTCTAA TTTTCCATAGATTTTCATGTCTTCTTTTCAATTCTCATTGAGTGTGGTTATGGTTTCTGGTGAAATGGAGCTTTCTAATTTAGTTTCTGATTCAGTTGTA AGCAAAACACAACTATTGTATGAGGAATTTATACTGAACCTTTTCTGAGAAGCATATTTTGTATTTTACTGAATTTTGATGTGAGATAAAAGAGTTGCTA TGTTCATAAGCCTTCACTTTTATGGAGTTGCTATGGTCCCCTCTACCTAAATGTTTGATGCC BLAST
Tissuepods
Gene nameLI_gene_137072; 
Additional informationdetails; 

Expression of Ll_transcript_504072

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_504072

BlastpAP3-complex subunit beta-A from Arabidopsis with 52.04% of identity
BlastxAP3-complex subunit beta-A from Arabidopsis with 50.9% of identity
EggnogThe coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
KeggLink to kegg annotations (AT3G55480)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432911.1)
PfamAdaptin N terminal region (PF01602.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;