Ll_transcript_478144

• Id Trinity: TRINITY_DN44447_c0_g1_i1
• Name Transcript: Ll_transcript_478144
• Sequence: ACACTTTTCACTCTCTTCTGTTCCTCACAATATAAACCAAAACACATGCTTTAACATTCTATCTACTTTCATTATTCAATGGCTTCTTCTTTTTCCCTTT ATATATCAACTCAATGCTTCTTCTCCAATACCCAGTTCAAAGGTTTCCGCCATGGTTTTTCATGGCGACCCACTTGTCCAGTTGATTCTCATGTTGAAAA CAAAGTTCGACCCATCAAAGCTTCGGTTGATTTATCTTCTTTTCCATTGTTTCAGACCCCCAAAGTTGAAGAGCCATCTTCTGATGCGTTGGAGCCTGCA GATCCTGATTTTTACAGGATAGGTTATGTCCGAAGCGTGCGAGCTTATGGAATTGATTTTAAGGAAGGACCGGATGGGTTTGGTGTTTATGCTTCAAAAG ATGTAGAACCTCTTCGCCGAGCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACTATAAGCAAGAAGCTCCCGTGGATGTTTTTCCCTGATAT AATCCCAGTGGGTCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTGGGACCTACGGTTAGCGTCCCTCCTCTTATTCTCATTTGAC TGCGAAGACAACTTTTGGCAGTTGTATGGTGACTTTCTACCCAGTGCAGATGAGTGCTCTAGCTTACTTATGGCTACAAAGGAGGAACTTTTGGAGTTGC AAGATCCCGATCTTGCTTCTACAATAACAAACCAGCAACAACGAGCCTTAGAATTCTGGGAGAAGAATTGGCACAGTGGTGCACCTCTTAAAATAAAGCG TCTTGCTCGTGATCCTGAAAGGTTCATTTGGGCAATGGCTATTGCACAATCACGATGTATTAACATGAACATGAGAATTGGTGCACTAAATCAAGAAGCA AATATGCTGATTCCTTATGCTGACATGCTGAACCATTCATTTGAGCCGAATTGTTTTTTCCATTGGCGTTTTAAGGACCGGATGCTTGAAGTTCTTATAA ATGCTGGACAGCAGATTAAAAAGGGAGAAGAGATGACAGTTAATTACATGAGCAGAGAGACAAATGATGTGTTAATGCAAAGATATGGATTTTCATCTCC TGTGGTAATTTTCTTTCCCTTTGAACCTTGATGAAAAGAATGTTCTATATGCTTTAGTTCTTTGTCATGAAAACTTGTTGGCCGAGACTTTCCGATATTG CGACAAAAGCTCATTAAATCAGCTTTGAGCATAAGAAGAACAGGCGCTAAAAGGCTTTATGTATAATTGTCATTGTCAGCCACAGTATTACACTGAGAGT TTTGTAATACCATTCTTAATACACACTTCAATTTTATATTTTTATTATCCAAAATAAATAGAAGTGCCTCTCCATCTCCCTGCGGCATTTTGAAAAGCCA GACCATTGTCTGTATCGACGTTCTTAGTAGTTAATGGTATTACATGTTGTGACAAAACTTGCTGTATAGAAATTATATGTTACACTTGCACGAGTTACCG GAAATGCAATGGTTAAAAGAAGCAATTAGTGTATGTTTACAAAGTATCACGAGAAAACATATAACAAAGGTGCCAATAAGTTGCTTACATTGTTCAATGT TGAAGCAGTGATTTCTACTTCCATCTAGTTGATAAGTCTTCATTGTTAATGTTTTAGTAGTTTTAATCTTATTTCTTTTGGTACTACTTTATAGTGACAT AAAGAGTTTTGAAATGAGGAATGTGATAACACTAATTGTTAGGATCCGAACTGATTGTATGTGTGTGGGGGTATACAAGAGCATAGATGTTAATTACTGC TAACTTGTTACAGATATGGTTGAATTTATTACAAAGGAATGACTTAGACTTTGTAAAAATATCGGCAAGTTACTCCGATCTTCACAAAGTGGTTATCAGT CCCTACTACAACTTCTAAAGAATTAAGTAACGAACAATCTTAAGATGTTCTGTTCTCTCAAGGAGCACAATGATTTGATGCACTGTGGAGACCTGCCTAG TTGTCGCACGAGAGTCTCATGAGATATATACTCTTGAAGTCAATATCAATGAGTAATTGTTTGTCACAACAAAATCAGTTGAGAAGTGGCTTGAGTTGTT ACTCAGTATTTTGACACTGCACCCAATCCAGGATAGCATTTTGCTTCTTTTCTAGGAAACTAAGTGCATGTTTGGTTTTGTTTCCTTGTTTTTTAGTTGA TATTTCATTCACAAAACTTCGAAAACATGATATAAAGCACGAAAGCAAACCAAATAAGGTTCTAAATTTCATCCCACAACCACAGTATCCTAAAGTCAAT CTAAGTTAATCTTCTGTCCACCAGAGATCCAACCGAATCTGCACAAGAACATCGGATTATTTTGTTATGATCACATGTCCATTGTTACTGTAAAGTATAT CATGTACTGATTCTTCCTGAAAGTACTTCTATTTTTTTCTTCGATTATTGTTATTATGAACAATTCATTTAAAATCTTTATGTTATTTGGTATTAAATTT AGAGTTTTGAAACTGTAGTTCTCAGAGTAACTTACATTTGCAGAATCCTTGGGATGTGATCAAGTTCTCAGGCAACACACATATTCATTTGGACTCCTTC TTGTCAGTCTTCAATATATCTGGCCTTCCAGAAGAATATTACCATAACAGTATGTGCAATATGTATTTTATTTCTAGAATCTGATTCATTTATGCCTTTT CCTTTCTCTTTATTCAAAATGCCATTATTGAGGATAATACCAATATGGAGTTTATAGCAGATCGTCTATCAAACGCTGGGGATACTTTTGTTGATGGAGC AGTCCTTGCGGCAGCACGAACATTGCCGACTTGGTCAGATGGGGATGAACCCCCAATCCCTAGTGTGGAAAGAAAGGCTGCGAAGGAGTTACAAGACGAA TGCCAACGTATGCTTTCAGCATACACTACAACGGCTAAGCAAGACCAGAAATTGCTAGATTCCATGCCAGAAGCTACAAGGACACTTGAAGCTGCAATAA AGTATAGATTGCACAGGAAATTGTTCATTGAGAAAGTTATCCAAACACTGGAGATTTATCAAGAGAAAATACTGTTCTGATCCCAATATGCTAATTTTCA AGTAGTTAGAAATTTTTTGTAACACTGGCACATACCTGTATCACAAAAAAATGTTTTTATCCATGAATTGCAAGCTCAGTTCTATTAAATTCATTTTGTA ATGTTTTGCCTTTTTTTCTGTTCATTGGTCAAGCTCTTAGCAAAGTTAGAATATAGTTGTCAAAGGAATTAAAGAAATTCAAAGATTTCATCTTGCCTTT ATATGTGGATTATTTAATTTAGTGAATAGAAACATCA
• Tissue: pods
• Gene name: LI_gene_137713;
• Additional information: details;

Expression of Ll_transcript_478144

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.3
• PS3: 0.1
• PW1: 0.2
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478144

• Blastp: Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 from Arabidopsis with 71.59% of identity
• Blastx: Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 from Arabidopsis with 71.47% of identity
• Eggnog: Rubisco LSMT substrate-binding(ENOG410ZB51)
• Kegg: Link to kegg annotations (AT4G20130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426290.1)
• Pfam: SET domain (PF00856.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;