| Id Trinity | TRINITY_DN44842_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_317029 |
| Sequence | AAAAAATGAAGAGGCATTTTGGTCCTGAAAAAATGAAAATTTCCTAAAAATCTTAAATACAAGTTAAAATAATCCCTAAAGAATGTCTCTAAATTTGATC CTGAAAAAAGACAAAATAATCCGAAAAGGAGAGGGTGAAATGAGAGTTTGGAGAGCCACACAAAAAATGCAGAGAGTGATGAAGTGATAGTGTAATGATG TTTGGTTTGAGTTTTCATATGTAACAGACATGGCTTCTTCTTCTACTCTCTCTCTAACTTTCACTCTCTCCTCCACCATCACTTCGTCCTCTTCTTATCT CCCCATCTTCACTCCCACTTTACTCACCAAACATCATATTCACTTATTCTCTTCCAAACACAAACACAAACACAATCACAGTCTCAAACAACGTGTGTTC TCAGTTTCGTCTTCTTCTTCCCCTTCTCTTGAAGCTTTGATATTTGACTGCGATGGTGTCATTTTAGAATCAGAGCACTTGCATCGTCAAGCATACAACG ATGCATTCACTCACTTCAATGTTCGTGTCCCTTCTTCTTCTTCTTCTTATGATGATCAACAACCATTGAACTGGGGTATCCACTTCTACGATGAACTACA GAACCGCATTGGTGGTGGCAAACCCAAAATGCGATGGTTCTATTCTCTCCCTTCCCAACTTACTCAAAGTTTTCATTTTTGGCTTTTTTATTCAATTTTA TTTTCATGGGGTTTCCTTAAACTATGTGTTGTTTTGTTTTTGGGATGTTTAAGGTATTTTAAGGAACATGGGTGGCCCTCTTCCAACGTATTTGAGACTC CTCCAACTGATGATGACGATCGAGCCAAGTTGATTGACACTCTTCAGGATTGGAAGACTGAGAGATACAAAGAAATAATCAAGTCTGGAACTGTAGAACC CAGACCTGGAGTTTTGAGACTAATGGATGAGGCCAAAGCTGCTGGGAAAAAGCTAGCTGTTTGTTCTGCAGCAACTAAAAGTTCAGTTATTCTTTGTCTG GAAAACCTTATAGGAATTGAGCGCTTTCAAAGCCTTGATTGCTTCCTTGCTGGTGATGATGTGAAGGAAAAGAAACCTGATCCATCAATATATGTGACAG CTTCCGAGAAGCTAGGTGTTTCAGAGAAAGACTGTTTGGTAGTAGAGGATAGTGTTATCGGGTTACAGGCAGCAACAAAAGCAGGGATGTCATGTGTGGT TACCTACACGTCTTCTACAGCGGAACAGGATTTCAAAGATGCCATAGCAATCTACCCCGACTTGAGTAACGTCAGATTAGAAGATTTGGAATTACTACTT CAAAATGTAGTAGCTGCTAAATGAGAAGCATGCTTGCATCTTGAAAATGTTTATCACAAGGTTAAGATTTTTTTAACACCGTATTATATATTCATTGATG GCATATGTATACATGTAAGATATAATGTGAAAAAGAATTCATTGCAAGATGTAATAAAGGTCACAATCTAATGTTTGTACCTTGTCATATTAAATTCCAA TGCTAGATGGAAATTTCCCTTGGCAGTTCTTCAGGCTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_138439; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_317029
| Blastp | Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 from Arabidopsis with 68.77% of identity |
|---|---|
| Blastx | Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 from Arabidopsis with 70.71% of identity |
| Eggnog | HAD-superfamily hydrolase subfamily IA variant 3(COG0637) |
| Kegg | Link to kegg annotations (AT4G39970) |
| CantataDB | Link to cantataDB annotations (CNT0000554) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462441.1) |
| Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |