| Id Trinity | TRINITY_DN44862_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_317405 |
| Sequence | AAAAGCTTCTCCCCTCACCCATTTCAATGGGTCCCTTCCATTCATTAGAAAAATTGTTACTGTAATTCAAGTGATGAATATGGTTGAGTTCTGTTGTGGT GTGGTAGGAGAAACTGAATCTCAAACTCCAATTGAACCAACCTCACGGCGTCGCAGCCGTGACGTCCTCCCTTTCAAATACATAGCTGACGTGGCACCGT CGCAGCCTGATTCTTCTCGTAAACGGCCAAAGCTCGACCTCTCCGATTGCCAAAACGCCGTGGAAAACCGCAAACCTGTTAACGACGAAGACAAGCAAGC TAAGGAAGAAGGAGATTCAAACGTAAACGACAACGTCGTTTCGGGAACGGAGGTGATTGAACAGTTACCTCCTCCAAAGTTTGGAATAACATCTGTTTGT GGTAGAAGAAGAGATATGGAAGATTCCGTTTCTGTTCATCCTTTCTTCTCTCAACAAGAGTTCCATTACTTTGCTGTCTTCGATGGACACGGTTGCTCAC ATGTAGCGACTATGTGTAAGGAGAGGCTTCACCAGATTCTGAACGAAGAGATTCGTGAAGCACGAGAGAAGAATATGGAATTGGAATGGAAAAAGGTGAT GGAAAAAGGTTTTGGTCTCATGGACGATGAGGTTCAGAAGCGGAGCCATAGCGATAACCAAAGCTTGAGATGCAGGTGTGAGCTTCAGACTCCGCACTGC GATGCCGTCGGATCCACCGCCGTCGTCGTCGTTGTGACACCGGAGAAAATCATCGTCTCCAACTGCGGTGATTCGCGCGCTGTTCTTTGCCGTAAAGGCG TCGCTATCCCTCTCTCCTCCGATCACAAGCCAGACCGGCCTGACGAGATGAACCGGGTTGAATCAGCTGGAGGGCGCGTGATTAATTGGGATGTCCCTAG AGTTCTTGGAGTCTTATCCATGTCTAGAGCCATAGGTGACAATTATCTGAAGCCTTATGTGATATCTGAACCGGAGGTGACAGTGACCAAACGGAGTAAC GATGATGAGTGTTTGATACTGGCGAGTGATGGTTTGTGGGATGTGGTATCAAATGAGACTGCGTGCGGGGTGGTGAGGATGTGCCTGAAGGCGGAGAGGC CGCCATTGCCACCGGGGTCTCCGGGGACGGTGGATGGTTCAGACAGGGCGTGCTCTGATGCGTCCATTTTGCTTACCAAGTTGGCATTGGCAAGGCATAG TTCGGATAATGTGAGCGTGGTTGTGGTTGATTTGAAAAGAGATAGACAATTCAGTTGCAGAAACGTCACCAACAATAACAACAACAACGTTAATTAATTT AACGTTTGAAATAAAACAAAAAACTAGTGAATGAATTGTCTTTTTTTAAACCGAAAAATGGTGGCATTGGCCAGCTTCCGTTTTTTTCTACTTGGTTAAG AAAAATGGATCAGGGTTTAGCCATCTTTAGCTATTGTAATGGGAATGGAAGAAAAAATTATAGGAAATTTTAGTCTAGGAGGAACTTGTGTCAATAAAGG ATTAAAATATACCCAGTTGACACACTTTCTTTGTCCATAATGGAATCTATATATTGGATTTTGCTTTGGTTCAGCACTTCTGATTCTGATCTTTCGCTTT TTCTTTCAACTTGAATTACGTTAGGTGTGGTTGTTCATGTACAACGAATGTTATAACGTAATTTGTGATTCGTGGGAATATCGAAGACTGAAAAGTTTGT ACTCGTTGTTCAATCAATTGAACATGGTTTTAAATTCCCTCAAACATTCCTCATGCATGAATATAATCAATCACAGACTCATTTGCTTTCAAATTTTCCT CATCGTTTCTCAAAAGTTACTATGGTATGAGACGTAGGACAATGTTCAATTCTCCTAACTCGATTGATTCAAGCTTCATTTTGAGTAGAACAACCGAGAT TTGATGTCACTAATTGGATAATGAATCAAAAACAACAATATTTAATTTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_138479; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_317405
| Blastp | Protein phosphatase 2C 3 from Arabidopsis with 57.02% of identity |
|---|---|
| Blastx | Protein phosphatase 2C 37 from Arabidopsis with 56.35% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (AT1G07430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439444.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |