Id Trinity | TRINITY_DN44884_c0_g1_i6 |
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Name Transcript | Ll_transcript_317391 |
Sequence | AGCAAAGAGACATTACCGGGTGGATTGGCAGTGAACAGAAGAAGAGCCGAAAGAGGACTTTTGCAGTTGAAGGTCACAATTTATAATTTCTGATAAAAAA TGATGAAAGTATCTTTCTATCATCAAATTATTTTCTCTCATTCTAGGATGTTTTCGTGCATCTTATGCAGATCGAAGTTGTGGATTTGCTCTGTGTAGAA TCAGGTGAGGGTAAGCTGAGTTCATCAATGTTGCGAAAGCTTGAGGCTGAGAAGGCTAAACAATCATACAGTAAATCACATATATAGATCCGAAGATTTT GTTGAACTTTTCTTATATAAAAAATACAACTTTAAGGTCACATTTAGTGCCATTAGAAAAAGAATGTTGTGTTGTACTGATGTATAGGAGAGAATTATCA AACCATATCTTGTCTACAGTTCATTTAATATGGTGATGATAGCCAAATTGTATTTAATAAAGGGGAAAACGGCAAACATGTAGCCAAGCTCTTTATTTCC TTCTTAGTTGCACCCTGATTATATAAGATCAATCAATAAGAGCCTTAACCCTTCCGAAACAGCTTCAGTCTCATGAAATAAAAGGGATTGCAGCTGGGGC TATAACATAAACTGGGGAGCTCATCAAATTCATTCTGTGCTATATCAAGCATCCCCTCCAACGTTTGCATCAACAAGTACTGCACCTTCCAGCTTCAACA TTCCTCTTGATTCAACCAGCATCTAGAGGAAATCTGCTAGCCGTACAACTCAATGAAGATTGGTATGATATAGAGACAACATGCTGCGCACTGAGATTTT TGTTAGCCCTGAAACTCAATTCCTAACATGCCAAATGTATAAACAACGCATTAACTCATGATAAGGATGTAAGATAACTTTGTTTTTAAAATATATATAA ACACGACTAGGATGTCTGTTACACATGGTTTTGAGGGTCAAACTTAGGGACATTATGAATGATTTTCTCATTCCATGAGTGACAAGATTCTACCTGAGCA CAAGGAAGATTTGAGAAGATACTATACCACGAGCAGTGAGATTCCTTCCAAGTGAGGATGCCACATGATTCGAGGGAGCCTCAAAGTTGAGATTTTGACT GGGAAAACTGGGGCTGATATGGGCATTCAAGATAGGCATGAGGCTGTGATGGATATCCAGAGGAGTTTGAAGTTTGAACAAGCTTTATCAGGTGTTCCTG GATATGGCTATTCTTGTTGAGACCCAAGGAGAGAAGGTGGATAACATTGAGGATAATGTGGCCAATGCAGGTAACTTCATCATGGTGGAACCAATAGTCT GTATTGTGCCAATAAGATGAAGAAGGGAATCAAAAGGTGGGTCTTTTGGGTTTGTTCTGTGGTGGTGATTATGCTGATAGTGTGCACCATTGCAATGTTG TCTTCTTGACTAGGGAGTTTTTTAGAAGTTTGAGACTCTAAAGCTGTTTTAATTTCTTCTTTAAAATTTCAATGGTTCCTGGATTGTTAGGAACAGTTCT GTTAATTGATTGAATTAATTTATGTTTGCTGATTGTTCAAGAGAACTGAAGTTGCTGAGTAGAATTTTATTGGCAACATGTCAATATTTCCTTCTTTCTT GTACAAAGCTTTAGAGATAAAAAAAAGGAAT BLAST |
Tissue | pods |
Gene name | LI_gene_138522; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_317391
Blastp | - |
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Blastx | Syntaxin-112 from Arabidopsis with 34.25% of identity |
Eggnog | SYNtaxin(COG5074) |
Kegg | Link to kegg annotations (AT2G18260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423787.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |