Ll_transcript_411112

• Id Trinity: TRINITY_DN44921_c0_g1_i4
• Name Transcript: Ll_transcript_411112
• Sequence: CCGAATTCGTCATTAGAGGACAAGAGAGCATGCTTTACTTGTTGCCTCTCCTTTTTTCTGTTTTATTACCTTAAAAAACATGCTCCCTCTAGTATTACTG TATTACTGCACTTTCTTGTCTTTCAAGCTACCTCAAAAACTGTCATATTATCATATTTCTATAACATTGTTTTTTCTTACCTCACTTCTTAATTCCTTTC CTTCACATTACACTCTCAATTACATTTCTCATTTTTTTCATTCTTCCCTACAAACCCTAACAAACATTATTCTCTTTCTCATTTCACTTCTCTTTTCTAT TTAGCTACTACCATGGATGATCCTGAAGGAGATTCTAGTAATGAGTATAATTGGAACACCGATGATGAAGATGAAGTGTTTGGCATTACATCTTCGATTC CCAGCATAATTCAAGAAAGCTGTGGACATAACCTGCTTGTAAGCAGTTCAACTTGCACGTGTACCAAACAGGGCAAGCTGATTCTTCACTTTGTTGGAAT GGGATTTTCCAAAGACCAAGTGATCAAAGCAATTGAGGAAAATGTGGTAGGAGAAGAAAATGAGGAAGACATTTTGGAAACTCTGCTAACACTCACTACT TTGACTACTCTAGAGGATCCTTCACCAGGTGCTTCTAATAGGCCATTTTCTTCTGCTAAGAAAATTGTTAACCTACTTGATAGCTCTGATGATGAGGATA GTTATCCAGGAAGTGGGGAAAACAGTTTTAACTTTGAAAGGGACAAGATACTGACAGTACTAGTGAACATGGAATACCCTATTGAGGAGGCTTTGATAGC TATAGAGAAATGTGGCCCTGAAGCCGAAATCTGTGAGCTTACAGATTTCATTTGTGCTGCTCAATTAGAAAAGGAAATTGACACTCATCTTCAAAATTTG CCTAAGAAGAAACAAGATGTATCTGTTTCTATGCATAAAAAGCGAAGGCGTGGTTATTACTTTCACAGAGATAAGAGATTGAAACTTGATGATGAGGGGA AGGTATCGGCAATTGATATGGAGATGAAGCAAATGCGATCCTCTGAATCCATGACCGGATTTGGTACACGCAATCAACTCTATCCTGCTGTTGCAAGAAG GCTCCGGCATAAAGTAACAGCAGGCCAACCATACTTCTATTATGAAAATGTGGCTGGTGCTCCTAAAGGAGTTTGGAGGAAGATATCCAGTTTTCTGTTT GAGATTGAGCCAGAATTTGTTGATTCAAACTACTTTTGTGCTGCAGCAAGGAAAAGGGGATACATCCATAATCTTCCCATCGAAAATCGTTCTCGCCTGC TTCCTATCCCACCACTCACTATCCAAGAAGCTTTACCTACAACCAAAAGGTGGTGGCCTTCATGGGACACAAGAATACAACTCAATTGCCTTATAACTAC CATAGCTCCTGCCACAGTAACAGAGAAAATAAGGAAAGCCCTTGAGGAATGTGATGCCAAACCGCCTCCAACTGTCCGAGAATATGTACGTAAGGAGTGT AAAAACTGGAATTTGGTTTGGGTTGGGAAGAACAAAGTGGCACCTCTTGAGCCTGATGAATATGAGATGCTACTGGGATTCCCAAAGGATCACACTAGAG GCGGTGGAATCAGCCGGACAATGAGATACAAGGCACTTGGAAATGCATTTCAGGTTGATACAGTTGCCTACCATCTTTCAGTTTTAAAGGGTCGTTTTCC AAAGGGCATCAATGTTCTATCCCTCTTCTCTGGCATTGGGGGTGCTGAGGTTGCTTTACATGGGCTTGGGATAATGCTAAGAAATGTGGTATCTGTGGAA GTAGCCGAAGAAAACCGAAACATTCTTCGCAGTTGGTGGGAACAGACTAACCAACAGGGAAATCTAATTGAGGTTAAGGATGTTCAGCATGTTACTTGGG ATCAGTTGGAGCAATGGATAACCTCTTTTGGTGGATTTGACCTCATCATTGGAGGGAGTCCCTGCAACAACATTAGTGGCAGCAACAGGGTGAGTAGAAA TGGACTGGAGGGAAAGCACTCATCCCTTTTCTATGAATATTATAGGATTGTTGAGGCAATTATGCATATACAGTGATAACAAGCTTATGTAAAAATTACA TTTCACAAGTGATTTTGTTAATTCCAACTTAATTCTGTAAATGTACTTGGCAAGCTTATGTAAAAAAGGGGGAAATTAGATTACACAAGTGATTTTGTTA GTTCCAACTTAATTCTGTAAATGT
• Tissue: pods
• Gene name: LI_gene_138578;
• Additional information: details;

Expression of Ll_transcript_411112

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 1.1
• PS3: 1.5
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_411112

• Blastp: DNA (cytosine-5)-methyltransferase DRM1 from Arabidopsis with 49.65% of identity
• Blastx: DNA (cytosine-5)-methyltransferase DRM2 from Oryza sativa with 47.88% of identity
• Eggnog: DNA (cytosine-5-)-methyltransferase(ENOG410XQ4Y)
• Kegg: Link to kegg annotations (AT5G15380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422938.1)
• Pfam: C-5 cytosine-specific DNA methylase (PF00145.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;