| Id Trinity | TRINITY_DN45068_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_411742 |
| Sequence | TCACTATGTTCTATTTGCTCCTAATGTTCATTTCAGTGATATTTTTTTTCCTTTTATTGATGAGTTATGTTAGTAATAATTTATTTTCTCATTGATGATC ATTTCCATAATGATTATTCGATTGATTTATCTTCACACCAACACTCAACAATTATGCTAGTGGAGTTTCTACCTGTAGAAACTTTGCAATTTATAACACA TTTTAATTAATCATGAACTATGCAGAAAAGTAATTGAAATAAATGATGAATTATACAATACCGTAAAGTAAAGTGTTAAACCCATGCTTCTGAGCCCAGT AACAAAGCCATAGCCCAAGTGAGAAATGTGAAAATGAGAAAAACAAAACAACATTTGTTCAACAAATTCATCTCAAAATCGATCCACAAACTGAACATGT CGTGTTTCTTATCTTGCTGCGCATCTTTAACATGCGGTCTCTGCACTTCTGTAGCATCTGGGATCTCCCAAAAATCTGCGAGGATTGGTTACTGTGCTCT CTTTGGAGCCTCTCTAATCCTTTCTTGGCTTCTTAGAGAAGTTGGAGCACCCCTTTTGGACAAAATCCCATGGATTGATTCTTCCCATACCCACACAAAG GAATGGTATCAAGTGCAAGCAGTTCTTCGTGTGAGCTTAGGGAATTTCTTGTTTTTTGGTATTTTAGCTCTTATAATGATTGGTGTTAAGGATCAGAATG ATAGGCGTGATTCATGGCACCATGGTGGTTGGACTGTGAAATTGATCATGTGGCTTTTGCTTGTAATTCTTGCTTTTTTCATTCCAGATGTTGTTATGAT AGGTTATGGATTCATATCAAAATTTGGAGCTGGATTGTTTTTATTGATTCAAGTGATAATTTTACTTGATTGCACACACAATTGGAATGATGCATGGGTT GAGAAAGATGAACGGAAATGGTATGCTTATAAAAATATTTTATATAATTTTTACCAATGGATTTGTAGTTGCCGTTGCAGGCCTATCGTATATAATGAAT CTGCGTGTTTAGGTATATTGCTTTACTTGTTGTATCTATCGGATGCTACATTGGAGCGTATGCATTGTCTGGAATACTTTTCATTTGGTTCAACCCTTCG GGATATGATTGTGGCCTCAATGTCTTCTTCCTTGTCACGACCATGATTCTTGCATTTCTATTTGGTGTTATTTCTTTACATCCTCAGGTAAAGAATATAA TCCCTTTTAAACAATTGAGGTTCGATTATGTTCTGTGCTTTTGTGCGATATGAATTGATAGGTGATGGGAGAAAATCTTAAGGCTTTCCAAAAGTATAAT TTTTCTTGTATGCCTAATAGTCATAGAAGGCTAAAATCATGTAGTCACTTTGTGATGCTCTTGGAATAACTAGATGTTCGTAGAAGATAAACCTATTAAG TTATTCTCGGATATCATTCTCTATGCAAAGCAAAAGACATACAAGGATGTTTTTGGCGTTCTGCCAGTTTGCTGGTAATCCTTTTCTCAAGCTTAAGTTG GCTGTGGAACACATATTTTTATTTACTAGTTCGGTAAAATGGTTAATTTTCTGAAAGCTTTATTGAATTGGGTAAAAGCTGTGAATCTGCAACTTAATGT TGATGATGATATGTCCGTCATGAAAGTAATGCCATCTGAGAGAGAATTCTTTTAGTGAATGCCATGTTACCAAGTAGTACTTGGTAATAGCTTGCCAGTT GCCAACATCTTACCTCACCAATTCGAGGGAAACAATTGTCTCGGCATCAATTTACCCCTTCTGCGCATCCCCTTCCCTGTTCACAATTTTATTTGGTTCC TAGGGAATTATATTTTATAGTGTGCGAGTGAAAATTTAGTACCGTAGTACTCAGTTTCCATCCATGTAACTTCATGCGCTCATTCTTATTATTGTTAGAA AAATAATGGGAATGTAAAAACAGGTGAATGGAAGCTTGTTGCCTGCATCTGTGATTTCCATTTACTGTGCTTATTTGTGCTACACGGGCCTTCAAAGCGA ACCTCGTGAGTATGAGTGCAATGGTCTCAACAAGTCCAGAGCTGTCAACACAGGCACACTTGTTCTCGGCATGATAACAACAGTTCTATCAGTGTTGTAT TCAGCTCTTCGGGCCGGATCTTCAACCACATTCTTAACACCACCATCTTCGCCTAGATCAGGTAATAAAATATGCTTAAAGTCCTTTTTGATCCGGTATC TTGATTTGGTATTTTGGATTAAACTCTTTTACTCCTCTTTGGATATTCAATTACAGTCTTCTTTGTTTTATAAAAAAATGAAAGGGATTCCGACAATCTT AGATTTAGTAAATCAAATACTGACCCTGACCAACTTTAGAAACTTGCCTTTTGATTTAAGAGAATGGACACATTTGGTTTGCGAAAAAATAAGGAGCTAT TTGGTTTGCGAAAACTGTTTCTTTTTCGTTTTCTACTTTCATCGATAATTGCAAAAATGTTAACTTGTTTTCATTCTATTTCGATATTTCCTATTTTCAA ATTTCAAATATTTGTATAGAAAATGTATGAGAACTTCTTTTTACTTATTCCTGTACAAATCTTTGAACACAGGAAATAGAATGAAAACAAGGTGACCTTT TTGTAAATATTAACAGTAGCAGAAAATGAAACAGAATTTCTTTTCACAAACCGAACAGACCCTAAGCTTCATTCTTCGCCTTGTTAGGATCTCTTTTTCT AGTTATCATGTCGCTTTTCACACCTTATGTTTTTCAGGTGAGAATAAACCTCTTCTTGAGGAAGAAATGGAAGAAGGAAAGACAAAGAAAGAGGAAAAGG AAGCAAAACCAGTTAGTTATTCATACTCATTCTTCCACCTAATATTTGCCCTGGCTACCATGTATTCAGCTATGCTTCTTTCCGGGTGGACCAGCTCAAA TGAAGGCACAGACCTTATAGATGTCGGGTGGACATCGGTGTGGGTTCGGATTGGCACCGAGTGGGTCACTGCTGGGTTGTATATCTGGACTCTTGTGGCT CCTTCCCTGTTTCCGGACCGCGAGTTTGCTTAGTTCCCTCTCTTGTATATAAATTATTACTGTAATTGTTGCCATTGGATATATGTTATTGTAAGTTATG GCCTTCCTTCCATGTCTGCAAATAGAATGTCAGTGTTGCAAGAAAATGATGTATGTATAGATTCACCTATGTAAAATGGCATGCACTCTTACATCTATTA TTGTATATAGTCTTCCATGTTTGCTTCATTTGAGATACAAATGAATGTCGGATAATATACGGACCGTGTAGATTTTACACTATGCAGTGACACTGTAAAA GTTTTTTATATTGTCGTGCATCATCCATTATTTATATTTAATTGCCGAGAGTTGAGATGTTTTATTACCTTGTATGAGTGTTACTTTTAAAGTGATTATT AGAGTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_138850; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_411742
| Blastp | Probable serine incorporator from Monosiga with 33.33% of identity |
|---|---|
| Blastx | Serine incorporator 3 from Pongo with 28.88% of identity |
| Eggnog | serine incorporator(ENOG410XP7K) |
| Kegg | Link to kegg annotations (MONBRDRAFT_18904) |
| CantataDB | Link to cantataDB annotations (CNT0002349) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426195.1) |
| Pfam | Serine incorporator (Serinc) (PF03348.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |