| Id Trinity | TRINITY_DN45101_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_357798 |
| Sequence | TTTAAGGCCCACCCCTTTACGTTTCCAATATAGACAACACTATCATACTTGTTCCAAAACCCTTCTTCTATTCTTTCTTCTCTGTGCCGCCGTTTCCGAA TCTCTCTCTCTCTCTGAAAAAATGGCAGCAGCATACGCAGTGAAACCCACTAAGCCCGGTTTGGAAGAGCCTCTAGAACAGATCCATAAGATTAGGATCA CTCTTTCTTCCAAGAATGTCAAAAATCTCGAAAAGGTTTGCACTGATTTGGTTCGTGGTGCAAAGGATAAGCATCTCAGAGTTAAGGGACCTGTGAGGAT TCCAACGAAAGTTCTCAATATCACTACAAGGAAAACCCCTTGTGGAGAAGGTCTTTTTATTTTCCTTAAATTTTTAATCTTTGTTTGTTGTTGTTATGTG GTTGTTTGATTCTAATATGAAATGTTATGTTTTTAATGTTGAAATTCAAGTGGACATATTTTTTGTGGTTATCTTTGTTTTATTTGCAAATTGTAGTTTG TGTCGCGAAAAATTTGATTTGGTTTTATTTGACTGGTAACATGTTTGCTGCTTTTAGAGATGCTAATTGATAAAGGAAGAGTTTAGGTTATTGATTTAGT TTTGCTAAGATTTGTTGATTATGTGTTGTAATTTCAATTCTAAATGTCAATGGGGTGATGCTATTGATGCGATTAGATACCGTTTGACGCATAGATGGTG AGAGGGAAAATAATGGAATATAGTTCTAGTTTTCTTTGATTTCACTATTTTAGCGGAATCCAAATGTGCCACTTTTTAACTCGTGTTATGTCATTTTTTA TTTATAAAATGTATTGAACATTGAACACACCATATATGTTCTGTACTTCTGTTCATTGTTACCAAATACATGGTGCATGTACGCGATTCGTTTAGTATGT GGTATGCCACTATTTACATTATTATTGTTATGACATGACTTTCTTTAAGATGAAGCATGTACATGATACATGGAGTTTGGTACATGATATGTACGGTTAA TGAGAGAATATGATAATTATGGTTCTGTTGTGTCCTGTTCAAATACCTCAACCTAATGGTACCTTAATTGTTGATTGCCTCTCACTAATCAATTGTAATT TTGTAAACTAAAAATAATTTAAACATGGTTGGGGTCATGAGTGTTGATAGCAATTTAGAGTTCCAATAGAATCATTACCCGTCAATATGTATTTCCGAAT TGTTTCATTTTACATGGCTGATTTTGTTTCTTTTGTTCCGATCCTGCTTATTATTTCAGGTACCAACACATGGGACAGATTTGAGCTCCGTGTTCACAAG AGAGTCATTGATCTATTCAGTTCCCCTGAGGTGGTGAAGCAGATTACTTCAATCACAATTGAACCTGGTGTTGAGGTCGAGGTCACCATTGCAGATGCTT GATTCTAGTTATTTTATTTTCTTCTTCATTTTTGGTTTATGTTGGCCTGGAATATGATGAGTGTAGTACATTAGGGTTAATGCATTTCCTTCCACCGTTT AAATTTTTGAACTTCATTATTTGAGCTAGAGCTATAGACTTCTCGTCATTATGTTTTGTTTTCTCTGTGCCTTGACAAATGTCATGCTTAATATATTTTA AAATCATTTTACATTTTAAATATAATCGTTTTTTATTGAAATTATGCGAGTTTGTTGTATAGCAAATCCAATTGTTATGAGAACACCTAGTCACAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_138923; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_357798
| Blastp | 40S ribosomal protein S20-1 from Arabidopsis with 78.65% of identity |
|---|---|
| Blastx | 40S ribosomal protein S20-1 from Arabidopsis with 81.18% of identity |
| Eggnog | tRNA binding(COG0051) |
| Kegg | Link to kegg annotations (AT3G45030) |
| CantataDB | Link to cantataDB annotations (CNT0001524) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431524.1) |
| Pfam | Ribosomal protein S10p/S20e (PF00338.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |