Ll_transcript_400939

• Id Trinity: TRINITY_DN45216_c0_g1_i10
• Name Transcript: Ll_transcript_400939
• Sequence: GAAAAGGAGAAGCATCCTAAACACACGTTGAAGAACATCGCACACATTCTGCTTTTTTCTCTCTCTAAATCCAAAGCTTCTAATTCCAACTTCCTCATTC ATCCAATTTCTTCTGCAGATTAGAAAAAAACAATAAAAGAATATGAACAAGGATAAAATCTTCAAGTTAGCTAAGGGCTTCAGGGGGAGAGCCAAGAATT GCATAAGGATAGCCAGGGAGAGGGTGGAGAAGGCCTTGCAATATTCATACAGAGACCGCCGTAACAAAAAGCGGGACATGCGATCCCTTTGGATACAAAG GATTAATGCCGGCACTCGCCTTCATGGTTACTCACACATGGTGAAAACTATTTTTACCCATTGGGAGAGACATAACGAGTGCATCTTCTGTGAAACAAGA TGG
• Tissue: pods
• Gene name: LI_gene_139154;
• Additional information: -

Expression of Ll_transcript_400939

FPKM

• PAB: 0
• PNAB: 1.2
• PS1: 9.8
• PS2: 3.3
• PS3: 0.4
• PW1: 1.2
• PW2: 2.5
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_400939

• Blastp: -
• Blastx: 50S ribosomal protein L20 from Rhodospirillum with 72.13% of identity
• Eggnog: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity)(COG0292)
• Kegg: Link to kegg annotations (RC1_2313)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_016167189.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;