Ll_transcript_400938

Id TrinityTRINITY_DN45216_c0_g1_i9
Name TranscriptLl_transcript_400938
SequenceTAAAGCTTACCAATCAAATAATTAAAGTAAAAAGTAATTATTAATATGTTTGTGTGTTGGATTTTTTTTATTAAAACTTTAAAACTTTTTGATCAGAAAG CAAATTAATTATTTTCATATAGAAATTTTGTATATAAAGAAAAAATCGATTTTGGCGAAAGCAAGAGCATCCTCAACACAACACTGCTTTCCCTGAAGCG CCGTTTGCTTTGCACTACTTGTTCTTTTTATTCTCCATTTCTACACTTCCTTTTTCTCCTTTTTATTTTATTTTGAAGGTATCCTTTTCTTTTTGTTTCT TTCAATTCTTAATTTGCAACCAATCCCATTTCCCATTTCCACACCCCTTTTCGTCATTATATGATGTTGTTGTTTAGGTTTATGAGTACTTACTTCTATG TGTTTGATAAAATGTCTGACTTAGGTTTTTGCTGGGAATGTGTTTTTTTTAGTTTATATTCTGTGTTTTTTGGGTATGATTTATGAACCTAACCATTCAC TTTTCTGTTATTCATTTGGTTTAAAGCTACAATCTTGTGCATAAGGGTCGTTGAATAGTGTATTTGAATCTGGAACACGGTTTTTAGTTTTACTCGGTAG AGCAATGACAGATTTTTTGTGCATTCTGAGAGTATTATACCCCATGGATCAAAAAAAATATATAACACTTGAATTGTGAAATAGTTTTAGAAGTACTGAA CCTGTAGTGAAAACTTTAATTTTTTTCAGTTTGGTGTCCCTTAAATTTTGGGGTTTTCGTATTGATCTTATTGATATAATTTTCACCTTTAATTTGGGAA TTGGATCTTTGCTTTTGTTTTGTCCATGAATGATGAAAATGTAATTGCAGAGTATAAAGAACTAGAAAAGAATATGAATAAGGATAAAATCTTCAAGCTT GCAAAGGGCTTCAGGGGGAGAGCTAAGAACTGCATAAGGATAGCAAGGGAGAGGGTGGAGAAGGCCTTGCAATATTCCTACAGAGACCGTCGTAACAAAA AACGTGACATGCGATCCCTTTGGATACAACGGATCAATGCTGGAACCCGCCTTCATGGTGTAAATTATGGAAACTTCATGCATGGGCTTACAAAAGAGAA TATCCAACTTAACAGAAAGGTCCTGTCAGAGTTATCCATGCATGAACCATATAGCTTCAAGGCGCTAGTGGATATATCGCAGAAGGCATTTCCAGGAAAC AAGAATGTGGTGATTCCTCCAAGAAAGGTGAATTTGTAGAGCATTTGGCTCTTAACCAAACTATTAGATTAGAGCTAAGTTTCTATCAGAATTGGTAAGG ACCTTTCAGGATTTTGGGTTTGGCACCCTACAATTTATTGTAAACTTGCATGCCTTTGATTCTTGTGACCATGTTGAGTACTGTTGTGGTCTTGATGTTA CTCCTCCAGCCTCCCTTTTACTTGCTTCAGTATCAATAATTGATCAAATTGTTGCCATTATTAGACTCTATCAAAAGCTGAGATTTCACATTAGTTGGTT GTTTTGCATTTACAAATTTCAACTTGGTTCTGAACCCAAAATGACATTTTAGAATTGGTAAGTACAGACATTCACATTTACAGAAGGAG BLAST
Tissuepods
Gene nameLI_gene_139154; 
Additional informationdetails; 

Expression of Ll_transcript_400938

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_400938

Blastp50S ribosomal protein L20 from Rhodospirillum with 64.42% of identity
Blastx50S ribosomal protein L20 from Rhodospirillum with 64.42% of identity
EggnogBinds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity)(COG0292)
KeggLink to kegg annotations (RC1_2313)
CantataDBLink to cantataDB annotations (CNT0001777)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019459247.1)
PfamRibosomal protein L20 (PF00453.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;