Ll_transcript_400621

• Id Trinity: TRINITY_DN45260_c0_g1_i7
• Name Transcript: Ll_transcript_400621
• Sequence: AGAGATTCGAAAATACTGCACAAAACAAACCCTAATAAATTGTAGCTCCTTATTCGTAATAGCAAATTCGAAACACAGTTCAAAATTTATATTCGAAGGT TTTCGTCGCGAAATCCGAATGGGGAATAGAAAAGAACGTCGTCGTGCTGCTCACAACAACGCTGGTCGAAGAGTCAAACTCGATCTCTTTGCTCAACCCT CTGGAGTTTTGGGTGGCTCCATTGTACATGGCGATGCTGGAGAAGATGCCAGTTCACAAAATCGTGATGGGTTACTCAATTCACCCTCTTCTTCAGGTCA ACAACCACAGAATCCACTGCTGTTACTTGGGCAATATAGCGATGATGAAGCAGATGAGGGATCAAGCGAAAGGCCTACCGATGCAATGGTGCAAAGTCCA ATGCTGAATGAAGAGGGTAAGGGTTTACTTGGTGAAGTTTGCAACGACTTGGACATCAGTGTCTCGGCAGATCTTGTTGCTCAGAATGACGGACAACATA ATACAATTGAAAATTCTGATTCATTTGATATTGAAAGAAGTGGAAAAAATGAAAGTAATGTTGCTGCTGGTACTTCGCAAAATGAAATAGTTTCCACAGA CCAGATGCCAGTTCTTGAAACTTTGGATGAATGTGCTGGCACTGATATTAGTTTGGGATGGAAGATGGTGTTGCATGAGGAAAGCCAATGCTATTATTAC TGGAATGTTCAGACTGGGGAAACATCGTGGGAAGTGCCCCTGGTTTTGGCTCAGGCACCTCAGTTAACTAATCATCTGATACCTCCTCCTTCTGACAATG ATAAAAACGAGAGTGCTGCAATTGAAATGGATAATTCCAATGTTCCCTCAGCTGTGATGCAGGACACTTTATCTGCTCCCACAATTGATGGTTCTCTGGA AACTACAGTTACTTGTCATAAAGAATTGTGTGGGCATGAATCCCAAATGACTGGTGGTAACGGTGAATGTAGAAGTGAAAACCAAGCTTCTGATGCTAAT GGAACTGAATTGATAAGGAATAATGGTGTCAGATGTTTATGTTATGGTGGAGATCATTCATTTGATTCCAAGTTCAGTGTTGAAGAACAGCAGTCAGCCA TTGATTTTCCTTCTCGTCTTGTAAAACAGAGTGAGGGTTTGTTAAAGAGGCTGAAATCACTGGAAAGGTCAAACTCAAAGGGCAAACTACAAGGCGAGGA CTCCTTGTCAAAGTATATATTAGAGATTGAGATCAGGCTTTCTGATTTTCGGTCTCTTGCATCCTATGGGCCATCCTTGCTTCCATTCTGGGTGCATTCT GATAGGCAGATAAAACTACTTGAAAGTTCAATCAATGATGATTTGTTTTGGGATGCTAAATTAGCACATGACGAAGTTGAGGATAAACATGGCCATGTCA CTGCAGGATTGGTTGAGCAGCAGAATGGCATGGAACATGAGCCTGAAGTAGACCATAGTGATAAAAAAGTAAGCCTTGTTACTTCTGAAGTATCTAATGG ATCTCAGGTTGATGCTTCTGATGTACTTCTAAGAGATATCCATGATAAGGTTCCAACCAGTGGTCAGCATGTTCCTCTGTCCACAACTACTTCTAGTCAT ACCGAAACAGGTGTAGAAGTTAATACACAAGTTGAAACAACTCTAAATCCTGAGGAATCAACTCATAAACTTGGGTGCGATGTTGAAGATGATGTTGATA TGGATGTAGACATGGAAGTTGAAGACATGAGTTCCTCAGGCAATTCAACTGTCATGGATGTTTCAGTTGTAACAGAGTATGTGCAAACAGACCAACCACT TCAGGTTAATTCACTTGTTGATTACCATTCTTTGTTGCCAGAGGATGAATTTGTTGTTCCTCCTCCTCCTCCTCCAGATGATGAATGGATACCTCCACCT CCGCCTGATAGTGAGCAGGAGCCTCCACCACCACCACCTGATAATGAACAAGCACCTCCTCCACCTCCTGGTGATCCACTGATACCATCTTATCATATTC TCCCATCCTACACAGAAACAGGACAATCCCTTTCGTATGCCCAATATAGTATACCTTATCCTGGTGCTAGCTCCGAGTACTATGGGCAGACGGCTACTGG AGTCCCAAACAGTAATATATATGGACCAATTGCTATTCCACCATTGCAGCTCTACTATAGTGCAGTTCCTAACTCATACAATGAAAATACTCAAGTTATA ATTAATCCAACTGATCATGTCTCTTATTATGAACTTCAAGATGGAGCTGGTTCAGGTTCCACACTTGTCAATATTAGTGATTCTAGTGATGTTGGTGGGG CTGGCAGGGCATCTATGGATGTCCCTTCCACCTCATCTACCATCCATCCACCTGCAACTGTTTCAGTTGATGATTGTGGATTATTGCCACCAGCCAGTGC TGAAACTGCTGCATGCAGTGCTGCCCCAGTAGTTGCTAAAGCGCAAACTAAAGTTGTACGTAGTAGAAAGCGACCAGTTGTAGTTGGATCCTCATTAAAG TCAAATAAGAAGGTTTCGAGTTTGGTGGACAAGGTAGTTTTTGCCTTCTACGAATTTTTTTTATTCAGTCAGTGAATTGGGATTTCATGCCCTCGACTAT TCCTATCCAACATGAAATCCATCTCAGTTTCCAGTATACATTACTGCATTATTTTCTGTTGTGTATGTTATTGTTAGTGGAAGGCAGCTAAAGAGGAGTT GCTTGAAGAAGAGGAAGAACCCGAGAGTTTATATGAAGCCTTAGAAAGAAAGCGCCAAAGGGAAATAGAGGAGTGGCGTGCAAATCAAATTGCAAGTGGA GAGGCCAAAGATAATGCGAATTTTCAGCCTCTAGGTGGTGATTGGCGGGAGCGGGTTAAACGCAAGAGGGCACAAGCAGCAAGGGAATCTGCTGCGGTGC CTCAAGATGCAGCTGAGGATAAGCAGCAGCAGCCTGATTTGATTGAACTCTCTAAGGGTCTCCCATCTGGTTGGCAGGCTTATTGGGATGAGACCTCAAA GCAGGTTTATTATGGTAATACAATCACATCAGAGACAACATGGACTAAGCCTACAAGATGAACAATGATCTATCTTGGCACAGCTACATTGGCTAACATG GAGTTTCATTTTCAAAGAATTGTTTCTTTTCGTTTGATTATAGTATGTTCTGGTTCTATAAGTAGTAGTTTCAAAGGGCTTAGTAGATAAAAATCCATGA TGATGATCATGTTTGTATTGTTCCTGCAATTTTGTAACGAAAATATGGAGCAGTTTTTCTATATAAGCCACAACGGAAAAAAAATCTAGTTTATACCGAA ATCTTTATTTATTTTAAAAAGTGCATTTTAGACCAAGTCATAGTTTACGATCAAGCCGTCTAACCCGCTGAAGATCTGAAATCTGTGGCTGTATATGTTT TGTACGAGACGTTTCAATTTGGTACTAATGAAATTATTATGAGTAAGGGGTAATCCTTTC
• Tissue: pods
• Gene name: LI_gene_139244;
• Additional information: details;

Expression of Ll_transcript_400621

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_400621

• Blastp: -
• Blastx: Formin-binding protein 4 from Mus with 42.42% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434051.1)
• Pfam: WW domain (PF00397.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;