| Id Trinity | TRINITY_DN45299_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_401019 |
| Sequence | GGATGGTTGAGATTTATTGATGTCATTGGATATATTCTGGTCCAATGGTGCAGTAGAGAGTGTTGTTTGGGTATCTTCCCATGTACTACCCAACATAATC CTGGGAACGGTTCTTTTTTCCCCCACCATTATATGCACCCTTTGAAAGATCTAATTGTTGCTTTGAAGTGGAACAGCTGGAAAGTTAAAATCTTTAGAAG CCAAAGTTATCTAAATTTCCCACAACATAATTATCCTTTTCATTTCTCCTTCTGGACCCGTCTCTCTCTCTTGGAGACCCAAGTCTTGGTTCTCTGTATT ATCTAAACAATCACTCATTCCTTTTCTCTTATGATGTTCTCCACATGAAGCCCCTGTTTGTGGTGCTCTGCGATGAATAGAACTAGAGTTTGGTTGCACT ATAGCCACTGTGTCGTCCAAAATCATACTGGTGGGAGTCGGTAATGGAATATGTTGTGCCACCGGATGTCCGTAGAAGCGCCGTAACAAGGACACGTGAA AAACGGGGTGGATACGCACTGTGGAAGGAAGGTCTATTTTGTAAGCAACAGATCTGATGCGATGGAGAACTTGAAACAGTCCAAAGAACCGAGGAGAGAG TTTGTGGCACAGCCGGCGAACCACGATCACCTACTGGTATTGTGCAATTTTAAAAGGACCCAATCTATGTTCTTAAAGGAGCTCCATCACGGGACTACAA TTTGGAACATGGCCCAAGAAGTTGGTCATGGTCGGCGGTGGGCGACCATACAGAACCTAGAAGGAGGAAAACCCAGTAGTCAAATTCTTTGACATATTGT ACCAATACTCAACAAAGGAAAGATGTTGAAACCATTTCTTTGGGGTCGAGCCAATAAAGCATCAGAGATAGGATTGAAGGCACCTATTAACAACCTTCGT TTGTCCATCAAACTGGGGATGGTAGGCGAAACTAAAGCATAGAGTCGTACCCAATAGTCGAAAAAACTCTTTCCAGAATGAATTGAGGAAATCCCATTCT CGATTGGAGAAAATAGATCGAGGCACTCAATGCAATCATACTATTTCGGCCAAAAAATGATGTGTTAATACTGTTGTTGTGAACATATTAGGATAGACGA TCCACAATAACCCATATCACAGTATGCCACTGGGATGGAGTGTTGAATGAAGTAAGCCATAGGCTCGTCGGTACGACGTGAAAGGGCACTAACCACTCTA TTTGAGAGAATATCTCCCGGACATATGTTGAGGCGTGTTGCATTCGAGGAACCATTTTTCACTGAAGAATGCTATGGTATGGCCATGTTGCGACAACACT GCTCCAATCGCAACAATCGATGCATCTATTTCTACTTCAAAGGAGGCAGAGAAATCCGGCAATTACAGAATCAAAGTTTTAGTCATGGCATTTTTTAAAG TTGTAAAGGCCAGCCAAGCTTCATTTGTCCATATAAAATTTTGTTGCTTGAGTAGGTTGGTGAGTGGAATGGCATGTGAGGCGTACTATTTAACAAATTT CATGTAGAATCTGGTGAGGCCCAGAAAACCTCTGAGAGGCCAGTCCACCATAGCCTATATTTTATCCGGATGTGGTTGCAATCCCATCACCGAGATAATA TGCCCCAAATAACTCATAGAATCCACATCAAAAGAACACTTTGAAAGCTTGGCATGAAATAGGTTAGACTGTAATAGGTGCAACATGGTTTGTAAGTGTA ATAGATGATAAACAAGAATAGAACTATAAATCTAGATATCATCAATAAAACTAGAACAAACCGCCGCAAATGTAGCCTGAGCAAATCGTTCATGGCTGCC GGAAATGTAGAATCGGTGTTTGTCAGACTGAAGACATATACAAGAATTCAAAATGGCCATCAAACGTGTGGAAAGCAGTCTTGTGTGAGTCCGATAGATG CACCCGAATTTGATATTACCAAGATCGCAGGTCGATCTTAGAGAATATCGTTGCTCCACCCAACTCATCCAACAACTAATCTATAAATTAGTAATGGTGA TAGCATTGAGGGCCCGATAATTAACACAAAACCTCCATGTCATATCCTTCTTCTAAACTAGTAAAATTGGTTAAGAGAATGGGCTAGTGCTCGTGGTTAA AATCTCATCCTGCCACATGTTTTGAAGTATAGTAGTCATAGTCTATTTTTGAGAGTGTGGGTAGCGATAAGGTCTGGATGTGACTGGTGTAGAAGAGGGA ATGAGAGGGATGTGATGATCATGTGACCGAGAGGGAGGTAAAGTAGAGGGTTTTTTGAAAACAAATTTGTATTTGTTTAGGAGTATTTGTATTTGAGGGT CAAGGGATATTGTGGAATTCGATGTAGGAGGGTCTGCTTCTGTTGGAAGGGAAAAAATAGTAAAGGCATGATAGATAAAAATACCATCATTATGTAATAG TCTCGAGATCTGGTGAAAAATAGATAGTTATAGGTTGTAAGTGTTTTCCGTTAAGAGTGATATTAGAGTCGCCCAGTGAAAATTGCATAGAATGAATAGA GAAGTCAGACACAATGAGACCAAGGGTTTGAAGCCATTCAATATGAAAAACCACACTGACCCCTTTATAGACAGCAAGTAGAACGAAATAAGGAACTTCG TCTGTTGCAATGTGATAGGTGTTTCATTAGACAACCCACTGCAATAAATAGGTTCTTTGTTGCCCACCATGACCGGAAATTTCGGGGTTTCTGTAATGGG CATTGTAAAGAAATGTTGCAAATCTAGGTTTCAAAGTATTTTGTGAACTGTCAATGTCAACCAATATAGTGATTAATGTGAATCAGATCCTCAACAAGTG GTTTTGGATCAGTAGGAAGAGGGATATCGTTGGAAGACACTAAGCAAGTCAATTCTGCCTCCAGTTGGACTGGTCGACAATCATCTAACATCAATAAGAA TTTCATGGGCTGATAGCGGTGTCCGTGATGGTACCTTTCATTGCATTTGTTACACAACCCTTGTGCTCGCCAATCTTGCATTTGCGCTAGGGTGAGTCGA CGAATGAGTAGAGATGGTGTATGTGTAGGCGTGGGTGACCGGTTCTGTGGTTCAGGAACTTGAGTGGTTGGGGTTGGCTCGATTATATGGTCAAATCTGG GAAATCTTCGAGTAGAGTAATGAATTTTAGCTTCCACTAATTTTGCCAATCCCAAGTCGTCTGAAATTGAAGTGGGGCGGAGTATAGTCAACTCACAGCG AATCTTTGGTATAAGTCCTGAAATAAAGCAATTCAATATGATTTCATGTGATAAACCCCATATTCTATTAGATAGTTTCTCAAACTGTTTTCTATATTTC GCCACAGTCCCGATCTGGTCGGGTTTGAAAAGTTCTGCTTGGTGGTTAATGTAAGTGGAGGATCCGAAACAATTCTCCAGGGCCCGTGTAAACAATTGCC AGTCCAAAAGTTGGGAGTTATGGAACATCAATTTGAACCAACTGAACGCCTCACCTTGAATGTAAAAGGAAATCATAGACTTCTGATGTTTTGGTGGCAC CAAGTAAAGCTGGAATAACTGTTCCGCTTGAAGTATATAATCTAAAGGCTTAGATCCATCAAAAGAAATAAGTTGTAGTTTAGGAGGTTGAGGTTGCGGA ATAGGTTGCTGAAATTGGTTGTTTGAGGGTGACAGGTTGGGTTGAGGGCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_139326; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_401019
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 29.36% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459949.1) |
| Pfam | Retrotransposon gag protein (PF03732.16) |
| Rfam | - |
| GO | - |