Id Trinity | TRINITY_DN45299_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_401020 |
Sequence | GGATGGTTGAGATTTATTGATGTCATTGGATATATTCTGGTCCAATGGTGCAGTAGAGAGTGTTGTTTGGGTATCTTCCCATGTACTACCCAACATAATC CTGGGAACGGTTCTTTTTTCCCCCACCATTATATGCACCCTTTGAAAGATCTAATTGTTGCTTTGAAGTGGAACAGCTGGAAAGTTAAAATCTTTAGAAG CCAAAGTTATCTAAATTTCCCACAACATAATTATCCTTTTCATTTCTCCTTCTGGACCCGTCTCTCTCTCTTGGAGACCCAAGTCTTGGTTCTCTGTATT ATCTAAACAATCACTCATTCCTTTTCTCTTATGATGTTCTCCACATGAAGCCCCTGTTTGTGGTGCTCTGCGATGAATAGAACTAGAGTTTGGTTGCACT ATAGCCACTGTGTCGTCCAAAATCATACTGGTGGGAGTCGGTAATGGAATATGTTGTGCCACCGGATGTCCGTAGAAGCGCCGTAACAAGGACACGTGAA AAACGGGGTGGATACGCACTGTGGAAGGAAGGTCTATTTTGTAAGCAACAGATCTGATGCGATGGAGAACTTGAAACAGTCCAAAGAACCGAGGAGAGAG TTTGTGGCACAGCCGGCGAACCACGATCACCTACTGGTATTGTGCAATTTTAAAAGGACCCAATCTATGTTCTTAAAGGAGCTCCATCACGGGACTACAA TTTGGAACATGGCCCAAGAAGTTGGTCATGGTCGGCGGTGGGCGACCATACAGAACCTAGAAGGAGGAAAACCCAGTAGTCAAATTCTTTGACATATTGT ACCAATACTCAACAAAGGAAAGATGTTGAAACCATTTCTTTGGGGTCGAGCCAATAAAGCATCAGAGATAGGATTGAAGGCACCTATTAACAACCTTCGT TTGTCCATCAAACTGGGGATGGTAGGCGAAACTAAAGCATAGAGTCGTACCCAATAGTCGAAAAAACTCTTTCCAGAATGAATTGAGGAAATCCCATTCT CGATTGGAGAAAATAGATCGAGGCACTCAATGCAATCATACTATTTCGGCCAAAAAATGATGTGTTAATACTGTTGTTGTGAACATATTAGGATAGACGA TCCACAATAACCCATATCACAGTATGCCACTGGGATGGAGGTAAGTGAGTAATAAAATCCATAAAAATTTCCGCCCACACTTTTTTTGGTATTGGTAACG GCTATAGTAATCCATGCTGCTTTGCTGGTAAATATTTGTTGTATTGGCATATTAAACAGTGTTGAATGAAGTAAGCCATAGGCTCGTCGGTACGACGTGA AAGGGCACTAACCACTCTATTTGAGAGAATATCTCCCGGACATATGTTGAGGCGTGTTGCATTCGAGGAACCATTTTTCACTGAAGAATGCTATGGTATG GCCATGTTGCGACAACACTGCTCCAATCGCAACAATCGATGCATCTATTTCTACTTCAAAGGAGGCAGAGAAATCCGGCAATTACAGAATCAAAGTTTTA GTCATGGCATTTTTTAAAGTTGTAAAGGCCAGCCAAGCTTCATTTGTCCATATAAAATTTTGTTGCTTGAGTAGGTTGGTGAGTGGAATGGCATGTGAGG CGTACTATTTAACAAATTTCATGTAGAATCTGGTGAGGCCCAGAAAACCTCTGAGAGGCCAGTCCACCATAGCCTATATTTTATCCGGATGTGGTTGCAA TCCCATCACCGAGATAATATGCCCCAAATAACTCATAGAATCCACATCAAAAGAACACTTTGAAAGCTTGGCATGAAATAGGTTAGACTGTAATAGGTGC AACATGGTTTGTAAGTGTAATAGATGATAAACAAGAATAGAACTATAAATCTAGATATCATCAATAAAACTAGAACAAACCGCCGCAAATGTAGCCTGAG CAAATCGTTCATGGCTGCCGGAAATGTAGAATCGGTGTTTGTCAGACTGAAGACATATACAAGAATTCAAAATGGCCATCAAACGTGTGGAAAGCAGTCT TGTGTGAGTCCGATAGATGCACCCGAATTTGATATTACCAAGATCGCAGGTCGATCTTAGAGAATATCGTTGCTCCACCCAACTCATCCAACAACTAATC TATAAATTAGTAATGGTGATAGCATTGAGGGCCCGATAATTAACACAAAACCTCCATGTCATATCCTTCTTCTAAACTAGTAAAATTGGTTAAGAGAATG GGCTAGTGCTCGTGGTTAAAATCTCATCCTGCCACATGTTTTGAAGTATAGTAGTCATAGTCTATTTTTGAGAGTGTGGGTAGCGATAAGGTCTGGATGT GACTGGTGTAGAAGAGGGAATGAGAGGGATGTGATGATCATGTGACCGAGAGGGAGGTAAAGTAGAGGGTTTTTTGAAAACAAATTTGTATTTGTTTAGG AGTATTTGTATTTGAGGGTCAAGGGATATTGTGGAATTCGATGTAGGAGGGTCTGCTTCTGTTGGAAGGGAAAAAATAGTAAAGGCATGATAGATAAAAA TACCATCATTATGTAATAGTCTCGAGATCTGGTGAAAAATAGATAGTTATAGGTTGTAAGTGTTTTCCGTTAAGAGTGATATTAGAGTCGCCCAGTGAAA ATTGCATAGAATGAATAGAGAAGTCAGACACAATGAGACCAAGGGTTTGAAGCCATTCAATATGAAAAACCACACTGACCCCTTTATAGACAGCAAGTAG AACGAAATAAGGAACTTCGTCTGTTGCAATGTGATAGGTGTTTCATTAGACAACCCACTGCAATAAATAGGTTCTTTGTTGCCCACCATGACCGGAAATT TCGGGGTTTCTGTAATGGGCATTGTAAAGAAATGTTGCAAATCTAGGTTTCAAAGTATTTTGTGAACTGTCAATGTCAACCAATATAGTGATTAATGTGA ATCAGATCCTCAACAAGTGGTTTTGGATCAGTAGGAAGAGGGATATCGTTGGAAGACACTAAGCAAGTCAATTCTGCCTCCAGTTGGACTGGTCGACAAT CATCTAACATCAATAAGAATTTCATGGGCTGATAGCGGTGTCCGTGATGGTACCTTTCATTGCATTTGTTACACAACCCTTGTGCTCGCCAATCTTGCAT TTGCGCTAGGGTGAGTCGACGAATGAGTAGAGATGGTGTATGTGTAGGCGTGGGTGACCGGTTCTGTGGTTCAGGAACTTGAGTGGTTGGGGTTGGCTCG ATTATATGGTCAAATCTGGGAAATCTTCGAGTAGAGTAATGAATTTTAGCTTCCACTAATTTTGCCAATCCCAAGTCGTCTGAAATTGAAGTGGGGCGGA GTATAGTCAACTCACAGCGAATCTTTGGTATAAGTCCTGAAATAAAGCAATTCAATATGATTTCATGTGATAAACCCCATATTCTATTAGATAGTTTCTC AAACTGTTTTCTATATTTCGCCACAGTCCCGATCTGGTCGGGTTTGAAAAGTTCTGCTTGGTGGTTAATGTAAGTGGAGGATCCGAAACAATTCTCCAGG GCCCGTGTAAACAATTGCCAGTCCAAAAGTTGGGAGTTATGGAACATCAATTTGAACCAACTGAACGCCTCACCTTGAATGTAAAAGGAAATCATAGACT TCTGATGTTTTGGTGGCACCAAGTAAAGCTGGAATAACTGTTCCGCTTGAAGTATATAATCTAAAGGCTTAGATCCATCAAAAGAAATAAGTTGTAGTTT AGGAGGTTGAGGTTGCGGAATAGGTTGCTGAAATTGGTTGTTTGAGGGTGACAGGTTGGGTTGAGGGCCT BLAST |
Tissue | pods |
Gene name | LI_gene_139326; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_401020
Blastp | - |
---|---|
Blastx | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 29.36% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459949.1) |
Pfam | Retrotransposon gag protein (PF03732.16) |
Rfam | - |
GO | - |