Ll_transcript_323674

• Id Trinity: TRINITY_DN45342_c0_g1_i4
• Name Transcript: Ll_transcript_323674
• Sequence: GTTTAGCATTTTCCTCTCAAATCTGAATAGACTTGTGCATAGTTTTCCACTTTTCCTTATTTTGTCTCTAACAAAAAACTCTCTATCCTTTGGTTAAGCT TAGTCAACTTTAATGGAGCAAGAACAAGTGCAAAATCAGTGGATACCATTACCAGCAGAGGATAATGATGAAGAAGAAGAAGAAATAAAGGATACTATAG CTTTGGAAAGAAAAATACCACCCCATCATAAAAAAGATACTACTTTTTCCACTGATGTAACACCACCCTCTTCTTCCTCTTTCTTTTCTTCTACTTCTCC TATTAGCAATGGCCATAGTAATGGTGTTTCTTCAGGCTCAGTGGAAGAACCTCTTATTCTCAAGGAGGAAGAGAAGGAACCTCATATTCAGAAGGATGAG GGAGTTTCTGAAAATGGGAATCATGAGAGTGAAGCAATTGGGCTTGGAATTGTAGCTGAGTTTGTTGGAGATGCTATAAATGGAGAAGCTATACATTGTA CCACTGCTACTATTGATGTTGCTGCATTTCAGAATAGTAGTGCTGTTTATTTTGACAAACAACAAGGAATGTGGAAATGTCACCACTGCTCATGGACCAA GCGAATTGACAGTTCTTGGAACGTGCCCCAGTACAATGCCTTGCTGATGAATCACAAAACTATGATTCAATGTGGACCATGTTTTTTTTGTGAAATTAAA GGCAATGAAGTTAATGGACTTGAAGGGGTTCAAAATGGTGATGGTGAAAGGTCTGTTCTTCCAGAAAGCAACGGGGAAGGAGAATCTGAGATACAAGTAG AAAATTCAGATATCCAAAATGGTCTACTCAATGAGGTCAATCAAAATGACAAAGTCCATTCCAGATCAGAATTATCACCTCTACATAATTCATCGGAAGT ACAAGCTACAACTCCGCAGGCTTTCGGTGATGAAACTAGTGCAAAAGCAACTGCTAACTTGACAAATGAAATTGATCAGCAACTGGAAGACTTTAATGTT GAGGCAGTGTTGGCAAAACAAGAGACACATGACTTGTTCTGTCCTAATTGCAACTCTTGCATTACTAAAAGGGTTATCCTCCGGAAGAGGAAAAGGAACA TTCCTAAGCTAGACACTGAAACAAAGCCTGATAAGCCAGACACTAAGAGGGGTAATAGTTCTTCTGAAGATGATGTCATTGTCAACCAAGGTGGTCATGC AAGTGCAATATCCGATGCTGGTAGTCTATTAGCACATGATGTCAACCAAGGTGGTCATGAAATTGGAATACCTGATGCTGGTAGTCTAGCGGCACCTGCT GGTAATTATGAGCCCGAAAGTGAACCAGAAGTATTCAGATGTTCAACATGCTTGAGCTTCTTTATTGCCCTGAGAAATGGACTGTTCCCATGTTTTGCCG ATGCTCGTGAGCCTGAAACTTCACAACCTTTGATTATACCAGCATCAAATTTGGAAAATCCTTCACATGTAGCAGCTCCCAATGCAAATTGGTTTAGCTC TCTATTTACAAGCAAAGAGAAAAAACCTAGAGAGCATGCTGTAGATGCTGATTTTGTTGAAAATTCTAGAGCTGGTTCTTCTGAACCACATCACCCATCT TCAACTGCCATCAATATGCAAACCACTATAGGGAATGGTCATCCAGAAGGTCCACTTACTGATAGAGCTATAAGTAACAATGTAAAATTGGCACCTGATA ATGAACCTGAACATGGAGTAAATTCTCCGAATCCCTCATCTGTGCAATTAGTAACGACCGAAGCAGGGAAAGAAAATGGTCATCCAGAAGGTCCACTTAC TGATAGAGCTATAAGTAACAATGTAAAATTGGCACCTGATAATGAACCTGAACATGGAGTAAATTCTCCGAATCCTTCGGCTGTGAAATTAGTAACGACT GAAGCAGGGAAAGAAAATTACATCAAATCCAGAATCTCATCAGGGAGTGAGCCATTGGATGATCAGAAATATCTTAAGTCGTCCATTCAGAATAATTTAC CATCAATACAACCCTCTATACATAGTTTCAGTAATGTGATGAATGAATCAGAGAAGGTTGGAGTGGATTTTATAGATTCTTCGTCAAAGGAACCTTTTCT GACTGAAAATGTGAAGACTGACGTGGGAGAGAAAAAGAATGATTCAGTGGATATGATGAAGACAGATATGCCCTCAATGAATTTTCCTGGTGATATGGCT TCCAAGAGTGAGCATGTTCCATCAGCGACTGCTGCGATTGCCGAAGGGTCTCTAATCCGTAAGAAGTCACATAAAGGAGTAGAAAAGTCACCTGCAATTA CTCAAAATGGTCATTCCTCTTTGGTGCAAGAAGCACAATCACCCGCACAAGCGTTTAGCAATGCAGTAGTTGCAAGTGACACAGCCGGAGCGTTGAAATC CTCAACACCCCAGACAGCAGATGGTGTTCCGGTTCAATCCACTGTGGCAGAACCACACACTGAAATAGATATTGGAGAACAACCAAGAGCTGAAATGGGT GAACCACCCTTAAAATGGGAAATACTTAAAAGCATTGTGTATGGTGGCTTACTTGAATCAATCACAAGTCTAGGGATTGTGTCATCTGCTGCTGGTTCGG GTGCTGTTCCATTGAATATTGTAGCAATGGGATTCGCGAATCTGATTGGTGGACTCTTCATCATTTTTCATAATCTTATTGAATTGAGAAATGATCACTC TGGAGGGGATCTACAGCAAACAAACTTTATGCAAGAAGATCGGTATCAAGCACAACTCGGGCGCCGAGCAAACTTTCTACTTCATATTGTTGTAGCTATT TTATCATTCCTAATTTTTGGCTCTGTCCCTATTATTGTCTACGGCCTCCTGATTCATAAGAATTACTCTGGTGAGCTTAAGTTTGCAGTAGTGGCAGTTA CTTCTATTATATGCATCATTCTGCTTGCGATCGGGAAGGTTTACACCAAAAGCACGCCGAAATCATATACTACAACTTTGTTACGATATGTTACCTTGGC ACTTGCAGCCTCTGGAGTTTCCTACATAGCTGGAGGACTAATTGATAATCTGTTAGAGAATTTCAATGACCCAAAGTCAGGTTTTGTTCTTACCATTCCC TCTACAGGCACCAGAAGTGTGAAACCAGCATGGGTGCCTTACTGAAGCAATGAGATTACTAAAAGGAGTTTGAACTTCTTAGTGTTTAGTATTCACATCC TTGTAGGGCTTGTATGGAATAAGCATACTTCTGGTAAAACTTGAGAGTTCTAATAAGCTTTTTATTTTATGTGTCTTGACTACTTGGATTCATTCATCTA TGTTACACAAAGTGGAATCTTGGAGATGAATATTCAATAAAATCTTTCTTTTGGTTTTGCAGTGGACCAAGGGGACAAAAAAGTTTGCACTAGAGGAATT TTGAGATAGTGCATGTTTGAGAAATAATATCTGTGGTTAAATTATTGTTTATTTTTTGTACCATATAATTTGAGTTATTTTGAAATAAGTTAATTCAAAT ACACACATTGCATGGGG
• Tissue: pods
• Gene name: LI_gene_139435;
• Additional information: details;

Expression of Ll_transcript_323674

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 1.4
• PS2: 0.5
• PS3: 0.9
• PW1: 0.5
• PW2: 0.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_323674

• Blastp: Membrane protein of ER body 1 from Arabidopsis with 46.34% of identity
• Blastx: Membrane protein of ER body 1 from Arabidopsis with 45.85% of identity
• Eggnog: VIT family(ENOG41129ND)
• Kegg: Link to kegg annotations (AT4G27860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417204.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;