| Id Trinity | TRINITY_DN45342_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_323677 |
| Sequence | GTTTAGCATTTTCCTCTCAAATCTGAATAGACTTGTGCATAGTTTTCCACTTTTCCTTATTTTGTCTCTAACAAAAAACTCTCTATCCTTTGGTTAAGCT TAGTCAACTTTAATGGAGCAAGAACAAGTGCAAAATCAGTGGATACCATTACCAGCAGAGGATAATGATGAAGAAGAAGAAGAAATAAAGGATACTATAG CTTTGGAAAGAAAAATACCACCCCATCATAAAAAAGATACTACTTTTTCCACTGATGTAACACCACCCTCTTCTTCCTCTTTCTTTTCTTCTACTTCTCC TATTAGCAATGGCCATAGTAATGGTGTTTCTTCAGGCTCAGTGGAAGAACCTCTTATTCTCAAGGAGGAAGAGAAGGAACCTCATATTCAGAAGGATGAG GGAGTTTCTGAAAATGGGAATCATGAGAGTGAAGCAATTGGGCTTGGAATTGTAGCTGAGTTTGTTGGAGATGCTATAAATGGAGAAGCTATACATTGTA CCACTGCTACTATTGATGTTGCTGCATTTCAGAATAGTAGTGCTGTTTATTTTGACAAACAACAAGGAATGTGGAAATGTCACCACTGCTCATGGACCAA GCGAATTGACAGTTCTTGGAACGTGCCCCAGTACAATGCCTTGCTGATGAATCACAAAACTATGATTCAATGTGGACCATGTTTTTTTTGTGAAATTAAA GGCAATGAAGTTAATGGACTTGAAGGGGTTCAAAATGGTGATGGTGAAAGGTCTGTTCTTCCAGAAAGCAACGGGGAAGGAGAATCTGAGATACAAGTAG AAAATTCAGATATCCAAAATGGTCTACTCAATGAGGTCAATCAAAATGACAAAGTCCATTCCAGATCAGAATTATCACCTCTACATAATTCATCGGAAGT ACAAGCTACAACTCCGCAGGCTTTCGGTGATGAAACTAGTGCAAAAGCAACTGCTAACTTGACAAATGAAATTGATCAGCAACTGGAAGACTTTAATGTT GAGGCAGTGTTGGCAAAACAAGAGACACATGACTTGTTCTGTCCTAATTGCAACTCTTGCATTACTAAAAGGGTTATCCTCCGGAAGAGGAAAAGGAACA TTCCTAAGCTAGACACTGAAACAAAGCCTGATAAGCCAGACACTAAGAGGGGTAATAGTTCTTCTGAAGATGATGTCATTGTCAACCAAGGTGGTCATGC AAGTGCAATATCCGATGCTGGTAGTCTATTAGCACATGATGTCAACCAAGGTGGTCATGAAATTGGAATACCTGATGCTGGTAGTCTAGCGGCACCTGCT GGTAATTATGAGCCCGAAAGTGAACCAGAAGTATTCAGATGTTCAACATGCTTGAGCTTCTTTATTGCCCTGAGAAATGGACTGTTCCCATGTTTTGCCG ATGCTCGTGAGCCTGAAACTTCACAACCTTTGATTATACCAGCATCAAATTTGGAAAATCCTTCACATGTAGCAGCTCCCAATGCAAATTGGTTTAGCTC TCTATTTACAAGCAAAGAGAAAAAACCTAGAGAGCATGGTACTCTTAATAATACTAACAAACAATTCTTTAACACTGATGCTTATAGGGACATAAACTTC GCTACTGTTATTATTCTTTTAGAGTTCCATTTTATCAATGTCATTTTTTTTTTACTTTCTTTGAGGCAGTTTTAGTTTTGCTTGCCATGATTTTCAATCA AGATTCAAAATATTGTTAATGAAATCGTTCAGCCTCCAATTAAATTTCCTGTTTTATTGACATATAGCTGTAGATGCTGATTTTGTTGAAAATTCTAGAG CTGGTTCTTCTGAACCACATCACCCATCTTCAACTGCCATCAATATGCAAACCACTATAGGGAATGGTCATCCAGAAGGTCCACTTACTGATAGAGCTAT AAGTAACAATGTAAAATTGGCACCTGATAATGAACCTGAACATGGAGTAAATTCTCCGAATCCCTCATCTGTGCAATTAGTAACGACCGAAGCAGGGAAA GAAAATGGTCATCCAGAAGGTCCACTTACTGATAGAGCTATAAGTAACAATGTAAAATTGGCACCTGATAATGAACCTGAACATGGAGTAAATTCTCCGA ATCCTTCGGCTGTGAAATTAGTAACGACTGAAGCAGGGAAAGAAAATTACATCAAATCCAGAATCTCATCAGGGAGTGAGCCATTGGATGATCAGAAATA TCTTAAGTCGTCCATTCAGAATAATTTACCATCAATACAACCCTCTATACATAGTTTCAGTAATGTGATGAATGAATCAGAGAAGGTTGGAGTGGATTTT ATAGATTCTTCGTCAAAGGAACCTTTTCTGACTGAAAATGTGAAGACTGACGTGGGAGAGAAAAAGAATGATTCAGTGGATATGATGAAGACAGATATGC CCTCAATGAATTTTCCTGGTGATATGGCTTCCAAGAGTGAGCATGTTCCATCAGCGACTGCTGCGATTGCCGAAGGGTCTCTAATCCGTAAGAAGTCACA TAAAGGAGTAGAAAAGTCACCTGCAATTACTCAAAATGGTCATTCCTCTTTGGTGCAAGAAGCACAATCACCCGCACAAGCGTTTAGCAATGCAGTAGTT GCAAGTGACACAGCCGGAGCGTTGAAATCCTCAACACCCCAGACAGCAGATGGTGTTCCGGTTCAATCCACTGTGGCAGAACCACACACTGAAATAGATA TTGGAGAACAACCAAGAGCTGAAATGGGTGAACCACCCTTAAAATGGGAAATACTTAAAAGCATTGTGTATGGTGGCTTACTTGAATCAATCACAAGTCT AGGGATTGTGTCATCTGCTGCTGGTTCGGGTGCTGTTCCATTGAATATTGTAGCAATGGGATTCGCGAATCTGATTGGTGGACTCTTCATCATTTTTCAT AATCTTATTGAATTGAGAAATGATCACTCTGGAGGGGATCTACAGCAAACAAACTTTATGCAAGAAGATCGGTATCAAGCACAACTCGGGCGCCGAGCAA ACTTTCTACTTCATATTGTTGTAGCTATTTTATCATTCCTAATTTTTGGCTCTGTCCCTATTATTGTCTACGGCCTCCTGATTCATAAGAATTACTCTGG TGAGCTTAAGTTTGCAGTAGTGGCAGTTACTTCTATTATATGCATCATTCTGCTTGCGATCGGGAAGGTTTACACCAAAAGCACGCCGAAATCATATACT ACAACTTTGTTACGATATGTTACCTTGGCACTTGCAGCCTCTGGAGTTTCCTACATAGCTGGAGGACTAATTGATAATCTGTTAGAGAATTTCAATGACC CAAAGTCAGGTTTTGTTCTTACCATTCCCTCTACAGGCACCAGAAGTGTGAAACCAGCATGGGTGCCTTACTGAAGCAATGAGATTACTAAAAGGAGTTT GAACTTCTTAGTGTTTAGTATTCACATCCTTGTAGGGCTTGTATGGAATAAGCATACTTCTGGTAAAACTTGAGAGTTCTAATAAGCTTTTTATTTTATG TGTCTTGACTACTTGGATTCATTCATCTATGTTACACAAAGTGGAATCTTGGAGATGAATATTCAATAAAATCTTTCTTTTGGTTTTGCAGTGGACCAAG GGGACAAAAAAGTTTGCACTAGAGGAATTTTGAGATAGTGCATGTTTGAGAAATAATATCTGTGGTTAAATTATTGTTTATTTTTTGTACCATATAATTT GAGTTATTTTGAAATAAGTTAATTCAAATACACACATTGCATGGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_139435; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_323677
| Blastp | Membrane protein of ER body-like protein from Arabidopsis with 30.32% of identity |
|---|---|
| Blastx | Membrane protein of ER body 1 from Arabidopsis with 45.85% of identity |
| Eggnog | VIT family(ENOG41129ND) |
| Kegg | Link to kegg annotations (AT4G27870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417207.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |