Ll_transcript_323925

• Id Trinity: TRINITY_DN45384_c0_g2_i1
• Name Transcript: Ll_transcript_323925
• Sequence: CTTCTCACTTGACTCTACATAGTATTTTCCGTAGAGTTCTTAACAATGAAATCAACTCTATCTTCTTTCATTGGCCTTCGTTCAGCATCATCATGGTTCG AATTATATGCTGCCTTCTCCACATTCATGATGATTCTAAGAACAGCCATCAATGATCTCATACCATCACAAGTTCGATCCTTCATCACAACAAAGCTAGA ATCTTTCTTCTCCAATATTTACCAATCAACTAACACTGCATCTCTCACAATTAACCGAATTTGGGACGAAAGTTCGAGAAATAACGAACTTTATCAGGCT GCGTGCAACTACCTTCCCTCGAGAGTAAGTCAAAGTTACAAGTCGCTCAAAATTGGGAAACTAGATGACTGTAAAGATCTGATGTTCGCAGTGGATGCAA CAGAAGAAGTGGTAGATGAATTTGAAGGCATCAAGTTCACTTGGATGCTAGATGAAGGTTCTTCTGAAAAGGAACGTAGAGATTTAGACAAGCTGGCTTT CAAGTTAAGGTTCAATGAGAAACATAGAAAAATAGCAATGGAAAAGTACATACCCCATGTACAAAAAACATACGAGGACTTCAAATCTGAACGAAAGATT CTTAAACTGAACTCATGGTCAAATGGGTATTGGGGAGAGAATGAGTTATCACATCCTGCAACATTTGGAACACTTGGCTTGGACCCAGAATTGAAGCAGA GAATTATTGATGATTTGGAACGGTTCTTGAAGAGGAAGGAAATGTATAAGAGAGTGGGTAAGCCATGGAAACGTGGCTACTTATTATATGGTCCTCCAGG AACCGGAAAATCAAGCTTAATTGCAGCTATGGCGAACTATTTGAAATTTGATGTGTATGATTTAGATTTGAATTCTGTTTATTCTAACTCGGATCTTATG AGTGCAATGCGGAGTACAACAAGATGTTCAATTATTGTAATTGAAGATATAGATTGCAACAAAGAGGTGAATGCTCGATCACTAAGGGATGAGGAGAATT CATATTGTGATTATAGCCAAGATGCCAAGGTTGAAGATGTTAAGGTTGAAAGGTTTACTCTCTCTGGTCTACTTAATTGCGTAGATGGCTTATGGTCAAG CCACGGAGAGGAGCGAATTATAATATTTACAACAAACCATGTAGAAAAAATTGACCCAGCATTGTTACGCCCTGGTCGAATGGACATGCACATTAACTTA TCCTTCCTTAAAGCCAAGGCATTCAGAATCTTAGCCTCTAATTATTTTGACATTAGAGACAAGCATCCTCTGTTTGAACAAATTGAAGAGTTGTTGGAGA AAACAGAGTGCACCCCTGCAGAAGTGGCAGAGCAGCTGATGAGAAATGAAGATCCAGATATTGCTTTTGAAACACTGTTGAAATTTCTATTTGAGGTTGA CATGAAGAGGGAAGTGAAAAAAGGCAGTGAGAGTCGTAATAATAATAGTGAAAATTGACTGTATGAAACAATTTGTGGAATAAATGAAACAATGACAATT TGTCCATGTACAATCCTTTTCATTTGGCAATTATGAATTATTTAAGAGTTAATAACACCCGTCCCCTTGAGTTTTAGTGTAATTACACAAATCAACCCTC CATTTTTTAAAAGTTTACATAAACC
• Tissue: pods
• Gene name: LI_gene_139538;
• Additional information: details;

Expression of Ll_transcript_323925

FPKM

• PAB: 33.5
• PNAB: 10.7
• PS1: 108.1
• PS2: 5.2
• PS3: 15.4
• PW1: 46.9
• PW2: 34.4
• PW3: 12.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_323925

• Blastp: AAA-ATPase At2g18193 from Arabidopsis with 45.48% of identity
• Blastx: AAA-ATPase At2g18193 from Arabidopsis with 45.48% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT2G18193)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419047.1)
• Pfam: Domain associated at C-terminal with AAA (PF14363.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;