| Id Trinity | TRINITY_DN45422_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_469580 |
| Sequence | AAAACAGTGTTGGGTACACCCTGTTTGTGAAGCACGCTTTCTTCTACAGTTTTCTTTCATTCCGCAATGACCAAAATCCAATAACCCATCGTTCCCGATT CATTCATTCATTCATAACCGTTTCTCATGGCCACAAAGGAAACGGAGATTCTCTCTCGCCTCGCCGCGAACCACCTCCACCTCGCTCAATTCGAACCCTT ACGCGCCGTTCTCCTCGCCCTCCGCACCCGCAACCGTGACCTAGCTCGTCATTTTCTTCAAACCATTGTTTCCCGATCGGCACGATTCCACAACATCCTC TATTCATCATCTTCCCTTTCGCCTGCACTCCTTACGTATTTATCAACCCTTGAATTGTTGCAATTCGATCACGCTTCATCGGTTTGGAGTTTCGACGCTG AAACGCTGCGTTTACGCGCCGAGTTTCAGTTACTGGTTCAGAACCTAATTGACGTGGTTGATGATGAGGGTGGTGGTGGTGATGGTGAGGTTAGGAAAGT TTTGGATGCGGTTTTGGAGTTAGGTGTGAAGAGGCTGAGAGTGGATGGTGAAATTGAGAGTGTCGTGTCTGTTGAAGAAGGAGAGTTGGTTTGTTTGAAG AGGTTGGTTTTGGATCATGCGAGTGTTTTTGATGCGCTGTGTGTGAACATTCATCGGCAAATTCGACGGTGGGAGTGTGAGGATTCGGGGTTAGCGGTTA CTGTGAGTAATGAAGGTGAGAGAGGTGAGAGTTCTGGAGCGGAGTTATCTGAGGAGGAAGATGATGTTAGGGTTCTTGGAGGGATACAGAGGATTGGTCA GATTGTTCATTTGGATGCTATGAAGGAGAGTGTTAATGTAGGTGATGCAGAAGGGGCAGTTTCTCATATACGTTTCCTTCATTTTGATTATGGAGTGGAT CAATCCGAGTACCGCATAGTTTTGAAAGATATTCAAAAGGTTGTTTTATCAAGAAGCGAGTCTTTTGGGGAATCTTGGCACATCATGCGTAATCAATTGC TACAGATTTATAGTGAAGCTCTTTCATCAGATTGCGGAAATATTGTTCAAATGATACAGAGCATTCACGACGAGCTGTTGTTTCAAGAGATCGAAATGGA TAGAGTTCAAACTGAAAACTTCATTCCACGACCTCTTGTACGTCTTCAAAGATATCTGGCAGAACTGGAAAGTGGTACACATATAAATGACAAGGCATTG TTCTTTAATGAGGCAATCAGATCTTGCAAGACGGAGATGTATCATTATGCCCGTGTTTCTGGACTACATGTTCTCGATTGTATTATGGATACTGCCCTGT CTGCGGTGAAGAGGGAGCACCTGGAGGAAGCTAGTAATGTCCTCCAATTGTTCCCCCAACTTCAGCCTTTGGTAGCTGCCATGGGTTGGGATTTATTGCC TGGTAAAATTGCTGCACGGAGGAAATTAATGCAACTTCTTTGGACAAGTATGTCACAAGCAATTCGGCATGAAGAATCTTCTCTTTATGGTAATAAATCC GATGAGGTGTCCTGTGTGGAGCATCTATGTGATACTTTATGTTATCAGCTTGATCTTGCCTCTTTTGTTGCCTCTGTGAATTCTGGCCAGTCTTGGAATA CAAAGTTCTCAGTATTGCTTTCTAGAAAAAAACAAGTACCTTATGTAGATGAAGATCGTTATTCTGACCATTTTGTTGAGAACTTTGTGTTGGAAAGACT TTCAGTCCAAAGTCCTCTTCGGGTACTGTTTGATGTTGTTCCAGGCATAAAATTCCAGGAAGCCATTGAAATGATCAGTATGCAGCCAATTGCTTCTACT CTGGAAGCCTGGAAGAGAAAGCAGGATATAGAACTCATGCACATGCGATATGCTCTAGAATCGATTGTTCTTGCTTTAGGAGCAATGGAAAGGAATGTGT CTGATGAAATAGAAACTCATGGAGATGTGCCGCTATTCCATTTGAAGGATTTGCAGAACCATTTTGATGCAGTTAGTAATCTTCCTCGCAAGATTTTGAT GGTGAATGTCGTAATTTCACTACTGCATATGGATAGTGTCTCTATTAACATGATGCATGGTGGAGCACCAGGGAGTGGTTCTAAATTATCCAATGGTAGC TATTCGAAAGATGGTCATCCAATTAGAATTGAAGGGGGAAATAAAGTGGTTATATCTTTCACTGGTTTGCTACTTGAGATACTGCGCCACAATATTCCAT CATCTGTGATTGAATTAGAGAACATGCTAGATGAGGGTTTAAGCACAGCCAGCAGACAGGCTCTTGAGTGGAGAATCTCAATCTCAAAGCGTTTCATTGA AGAGTGGGAGTGGCGTTTGTCAATTTTGCAGCATCTTCTACCATTATCTGAACGCCAGTGGAGATGGAAGGAGGCATTGACAGTGTTACGCGCAGCTCCC TCCAAACTACTTAACCTTTGCATGCAGAAAGCGAAGTTTGATATTGGAGAAGAAGCAGTACATCGATTTTCATTATCTCTTGAAGACAAAGCTACCCTTG AGTTAGCTGAATGGGTAGATAGTGCCTGCAAAAAAACATCTGTAGATGATGTTGTGTCTCGTATACAAGATCTTGATTTTTCCTCTTTACGCTCCCAGTT GGGACCTCTGGCTACTATACTTCTTTGCATTGATGTTGCTGCCACTTCCGCCAAGTCTGCACAGATGTCTAAGCAACTACTTAACCAGGCCCAGGCAATG TTATCTGAGATATATCCTGGAGGATCTCCTAAAGATGGCTCCACTTATTGGGATCAGATCCTTGAAGTTGGAGTAATTTCTGTGTCACGGCGTCTTCTGA AGCGCCTACACGAGTTCTTGGAGCAGGACAATTCTCCAACTATTCAGGCAATCCTATCTGGGGAAATTGCCATCACATCATCCAAAGAGTCTCATCGACA AGAGCAAAGGGACCGTGCTCTTGCTTTGCTACATCAGATGATTGAAGATGCTCATATGGGCAAGCGACAGTTTCTGAGTGGTAAGCTTCATAACCTTGCA AGAGCTGTTGCTGATGAAGAAACTGAACTAAGTACTAGTAGAGGTGAAGGATTATATTCTGGTCGAGGTGTTATTTACAGCAGTGACAAGGACATTGTAC TTGGACTTGGGTTAAGAGTTGTTAAACAATCACCTTTGAGTTCAAGTGGCGAAGAAACCGGCCTGCAGTCTGCTGTTTATGACATTAAGGATTCTGGAAA GAGAATGTTTGCCCCCTTGAGTACCAAACATATGACATATCTGTCAGAATTCATTCTTCATGTTGCTGCAATTGGAGATATAGTTGATGGGACCGATACT ACTCATGATTTTAACTTTTTCTCTGTCGTGTATGAGTGGCCTAAAGATCTTTTGACCCGTCTTGTTTTTGAAAGAGGGAGTACTGATGCAGCTGGGAAGG TAGCTGAAATTATGTGTGCTGATTTTGTGCATGAAGTGATTTCTGCATGTGTGCCTCCAGTTTACCCTCCGCGATCTGGGCATGGATGGGCATGCATTCC AGTAGTTCCTACTTTCCCTAAGAGCAGCTCTGAAAATAAAGTACTCTCCCCCTCGTCTAAAGATGCAAAGCCTAATTGCTTCAGCCGTTCTTCAGCAACA CCTGGAGTGTCTTTATATCCTCTCCAGTTGGATGTAGTGAAACATCTAGCAAAAATATCCCCAGTGAGGGCTGTCTTAGCATGTGTATTTGGGAGTAGTA TACTGTATAGCAGCAGTAGCTCTTCGATTTCAAGCTCCTTGAATGACGAATTAGTGCAGGCTCCGGATACTGATCGGTTGTTTTATGAGTTTGCTCTTGA TCAATCTGAAAGGTTCCCAACTTTAAACAGATGGATACAAATGCAAACTAACCTCCATCGAGTTTCAGAATTTGCTGTAACTGCTAATCAAACAAATGAT GATGACAACCTGGAAGCCAGAACTTCTATTAAGAGAATTCGTGAACATGACACTGAGACAGAGTCAGACGTTGATGACATTGTTAGTAGCAATGCTATCC CGGTAACTCTGACAGACCTGAATAACCAAGGGGTTGAAGCGGCAGACTTATGGCATGATTCCTCAAAATCTGAGCCTTCACAAATTGACACCACAGTTTT CCTTTCTTTTGATTGGGATAATGAAGAACCATATGAGAAGGCAGTAGAACGGCTAATTGATGAAGGAAAGCTAATGGATGCTCTTGCACTTTCGGACCGC TTTCTACGTAATGGTGCATCTGATCAGCTTCTTCAGTTACTAATTGAACGTGCAGAGGAGTTCCATTCAAATTCTACACAGCGCCAAGGATATGGAGGAC ATAATATCTGGGGCAATAGTTGGCAGTATTGTCTAAGGTTGAAGGACAAACTCCTGGCAGCTAGACTTGCCCTAAGGTATCTGCACTCTTGGGAACTAGA TGCTGCTTTGGACGTCCTCACTATGTGCAGCTGTCATCTGCTTGAGAATGATTCTATTAGGAAGGAGGTTTTGCAAATGAAACAAGCTTTGCAGAGGTAC AGCCGCATATTAAGTGCAGATGATCATTATACGAGCTGGCAACAGGTTGAGGCAGATTGCAAGGAAGATCCAGAGGGTCTGGCACTTAGATTAGCTGGAA AAGGAGCTGTTTCTGCTGCACTAGAAGTGGCTGAAAGTGCAGGATTGTCAATTGATTTACGAAGAGAGTTGCAGGGTCGACAGCTTGTGAAGCTTCTAAC CGCTGACCCTCTCAATGGTGGAGGACCTGCTGAAGCCTCACGTTTTCTTTCATCTTTACGGGACACTGAAGATGCTTTGCCTGTTGCCATGGGTGCAATG CAGCTGTTGCCCAATTTGCGGTCAAAGCAACTTCTTGTTCACTTCTTCCTGAAGCGGAGAGAAGGGAATTTGTCTGATGTTGAGGTTTCCCGGCTCAATT CATGGGCTTTAGGGCTTCGCGTGCTGGCAGTCTTGCCAGTGCCATGGCAGCAAAGGTGCTCTTCCCTGCATGAGCATCCTCATCTGATTTTGGAAGTGCT GCTCATGAGGAAACAATTGCAGTCAGCTGCACTGATATTGAAGGAATTTCCCTCTCTACGAGAAAACAATGTAATTATTACATACGCAGCTAAGGCTATT TCCGTCAGTATCAGCTCACCTCCTAGGGAACATCGCATATCTGTTTCAGGATCCAGACCAAAGCAGAAGACAAGATCAGGTGCCCAGCCAAGACAGTCTT TCACGAGCAGTCTAAGTAACTTTCAGAAAGAAGCTCGAAGAGCTTTTTCATGGGCTCCAAAAGTTACTGTGGACAAAAGTGCTCCAAAGGATGTTTACAG GAAAAGAAAAAGTTCTGGATTGTCTCCTTCTGATAGAGTTGCTTGGGAAGCGATGACTGGAATTCAAGAGGATCGTATTTCATCTTTTTCAACAGATGGG CAAGAACGCCTTCCTTCAGTTTCAATTGCCGAGGAGTGGATGCTTACAGGTGACCCACTAAAAGATGAAAGCATCCGTTTATCTCACAGATACGAAAGTT CCCCTGACATTACACTGTTCAAGGCACTGCTCGCCCTGTGTTCTGATGAGTCCATGTCTGCCAAAAATGCCCTTGACTTGTGCATTAGTCAAATGAAGAA CGTGCTGAGTTCTCAGCAGTTGCCTGACAGTGCATCCATGGAAACAATTGGGAGAGCATATCATGCCACAGAAACATTTGTTCAGGGCCTACTTTATGCC AAATCCCTGCTAAGAAAGCTCACTGGTGGCAATGAATTGTTAAGTAATTCTGAAAGAAATAGGGATGCTGATGACACATCATCTGATGCTGGTAGCTCTA GTATTGGTAGTCAATCCACAGATGAGCTATCTGAAATCTTGTCACAAGCAGATGTTTGGCTGGGACGTGCAGAGCTGCTCCAGAGCCTTTTGGGATCAGG AATTGCTGCTTCGCTTGATGACATCGCTGACGGAGAGTCAGCTGCCCATCTTCGTGACAGGTTGGTTGTGGAAGAACGGTACAGCATGGCTGTTTATACC TGCAGAAAGTGTAAGATTGATATCTTCCCAGTGTGGAATGCATGGGGACATGCACTAATTCGGATGGAGCACTATGGACAAGCTCGTGTGAAGTTTAAGC AAGCTCTTCAGTTGCACAAGGGTGATCCTGGACCTGTAATTTTAGAGATTATAAATACAATTGAAGGTGGCCCACCAGTTGATGTTTCAGCTGTTCGTTC TATGTATGAACATTTGGCTAAAAGTGCGCCCACAATCTTGGATGATTCTCTTTCTGCTGATTCATATTTGAACATCTTATACATGCCATCAACATTCCCT CGTTCAGAGAGATCAAGACGGTCTCAATTATCTACAAACAATAATTCTATATCCAGTCGAGATTTTGAAGATGGTCCTCGGAGTAACCTAGATAATGTTA GATACAGTGAATGTGTTAATTACTTACAAGAGTACACACGTCAGCATTTGCTTGGTTTTATGTTTAGGCATGGTCACTACCATGATGCCTGCTTCTTGTT CTTTCCTCCTGATGGTGTGCCCCCACCACCACAGCCATCAATCCTGAGCGGAGTGTCTTCTTCATCTCCCCAAAGACTAGATTCTTTAGCGACTGATTAT GGGACAATTGACGACCTTTGTGAATTATGCATTGGCTATGCTGCTATGCCTATTTTGGAGGAAGTCATTTCTACCAGAATGTCATCAGCTGACTCACAAG ATGCAGTTGTGAATCAGTATACAGTTACAGCCCTGGCCCGTATTTGCCTCTATTGTGAAACTCACAAGCATTTCAATTATTTGTACAGGTTTCAGGTAAT TAAAAAGGACCATGTTGCTGCTGGACTCTGTTGTATTCAGTTGTTTTTGAATTCTTCTTCACAAGAGGAAGCCATCAGACATTTGGAACACGCTAAGATG CATTTTGATGAAGGGTTATCTGCAAGGCACAAAGGTGGTGAATCTACCAAAGTTGTCACAAAAGGTCTTAGAGGGAAAAGTGCCTCCGAGAAGCTTAGCG AAGAAGGTCTAGTCAAATTTTCTGCCCGGGTATCGATTCAGGTTGAAGTTGTTAAATCCTTTAACGATTCAGAAGGACCGCAATGGAAACATTCACTTTT TGGGAATCCAAATGAACCAGAAACTTTTAGACGAAGGTGTCAAATTGCAGAGGTTCTTGTTGAGAAGAATTTTGATTTGGCATTCCAACTGATCTATGAA TTCAACCTTCCTGCTGTTGATATATATGCTGGTGTTGCTTCATCTCTTGCTGAGAGAAAGAGAGGCGGCCAATTGACAGAGTTCTTTAGAAACATCAAGG GTACAATAGATGATGATGATTGGGACCAGGTCTTGGGTGCTGCAATAAACGTATATGCCAATAAGCATAAAGAACGCCCTGACCGTCTAATAGACATGTT AACTAGCAGCCACAGGAAAGTTCTTGCATGTGTAGTTTGCGGTCGTTTGAAAAGTGCATTTCAATTTGCTTCACGGAGTGGAAGTGTGGCTGATGTTCAA TATGTTGCTCATCAGGCATTGCATGCAAACGCGCTCCCTGTGCTTGATATGTGTAAGCAGTGGTTGGCTCAGTACATGTAAATTATCCGTGGAGTTGCAG AGTGTGGTTTGTCCAATGTGCATGTTTTGGTCAATTGATGCACAAATGCCTTGAAAGCAGGAATTAGATCATATAACTATTAATTGTAAAGATCAAGGGA CATCTTATTTGGTTCCAGTGATTTCACAGTTTCTTGTTTTGTTGAAGCTGTTTCTGTGATCCAAATTGGTCCAATATGTACGGCATTGCTACCATTGTGA AGATTGGAAGATCAGTGCCTTAGTGAAAATAAATCCATCACATGGCTTAAGCAGAAACTGTTGCATCTTAGTCCTGAATTGGGACCATCTGAATGTCAAG GACCACGGTTCCTTCAGCTCTTAGGACCCAATGGCAACAGAAAAGGTGAAATCTTCTATTTTAACCCTAATCTGGATGTTTACTCCTAACCACCCAACAT AATATGCATGTATGATGTATCAAAATAAGTTGTTGTATAAGTGATTTTATTTTTTCTCTATTGTTAATATGATTTTATAATTGTGGGGTTGGGTGTTAAA TGATGGGTATAAAGCAGAGGGTGGATTGAATTTTGGTTGATTATTTGATTCAATTATAAATGTCCATTTGGTGTATGGTTATTAACTGGTGAAGATACGT TGGACAGATGAATCACCAGTGAAATAGAATTGTGAATTTTGCATTTTAACGTAGAGGTGTATTTCTTTTAACAAATAGTTTGAATCTAATATGTTATACA ATACATTCTGTCATTATCGAGGGGCTAGACAAAGTTGCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_139617; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_469580
| Blastp | Protein DDB_G0276689 from Dictyostelium with 24.87% of identity |
|---|---|
| Blastx | Protein DDB_G0276689 from Dictyostelium with 24.49% of identity |
| Eggnog | Zinc finger, FYVE domain containing 26(ENOG410XRV7) |
| Kegg | Link to kegg annotations (DDB_G0276689) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414888.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |