Ll_transcript_425879

• Id Trinity: TRINITY_DN45510_c0_g1_i1
• Name Transcript: Ll_transcript_425879
• Sequence: AATAGAAAAGCAAAAAGTGAGAAATAATAAGCAATGCAAAACCATGAGTTGGTATACCTATGGCTAAGTTTTTGAGGCAAATACCAATGTCAATGCCGAG GCATACCTTGAGCCACAACCACCACCAAATGCCAAGGCAAGTTTTCATCACAAACCATCTTCTTCACTATCTTCTCCTCTTCACACTTCTTCCTTTTCCT TCTTATGCTGCAAACAATGAAGTTACTACTTTGCTTTCATGGGTTCATACTTTTTCCAACACCATTGTTCCTTCACCTTTTTCTAACTGGAACCCTTTTG ATTCTACTCCATGCAACTGGTCTTACATAAAATGCTCATCACAAAGCCATGTTATTGAGATAAATATTCAAGCTTTTGAGTTAGCCCTAACATTTCCTTC AAATATTTCATCACTTCCTTTCCTTCAAAAGCTTGTAATATCTGGTGCTAATCTCACTGGAACTATCTCATCTGATATTGGTGATTGCATGGATCTTATA GTCATTGACCTTAGCTCAAATAGTCTTGTTGGTAACATTCCTTCAAGTATTGGCAAACTCAAAAAACTTCAATACTTGAGTTTGAACTCTAACCAACTCA GTGGTGCAATCCCAATGGAGATTGGTTATTGTGTTAGTCTTATAAAACTTGACATATTTGATAACAATCTTAGTGGCTATATTCCTGTTGAGCTTGGAAA TCTTTCAAGTCTTGAGGTTCTAAGAGCTGGAGGGAATAAAGATATTGTTGGGAAGATTCCAGAAGAGCTTGGTGATTGTAGAAATTTAACTATATTAGGT CTTGCTGATACTAAAATTACTGGTTCAATACCTGCTTCATTAGGTAAGTTAAGTAAACTTCAAACAATGTCTATTTATAGCACTTTACTCTCTGGTGAGA TTCCAGCTGAAATAGGAAACTGTTCAGAGCTTGTGAACTTGTTTTTGTATGGAAATGATTTATCTGGGTCATTGCCAAAAGAGCTAGGAAGGCTTCAGAA GCTAGAAAAGTTGTTGCTTTGGCAGAATAGTATTGTTGGAAACATACCTGAGGAAATAGGAAACTGCAAAAGTTTGAAAGTTTTCGATGTTTCCTTAAAT TCTTTGTCTGGTAGTATACCTCAAAGTTTGGGGAAACTCTCAAATCTTGAAGAGATTATGCTAAGTAACAATAACATCTCTAGTTCAATACCACCTTGTC TTTCAAATCTCACAAACCTTGTGCAGTTGCAGTTAGATTCTAATCAGATATCAGGTTCAGTTCCACCAGAACTTGGAAAGTTAACAAAGTTAACAGTGTT ATTTGCTTGGCAGAATAAGCTTCAAGGTTCAATTCCGTCAGCATTGGGTGATTGTTTAAGCCTTGAAGCTTTGGATTTGTCATACAATGCACTCACAGGT AGCTTACCCCCTGGCCTGTTTAAGCTTCAGAATTTAACAAAGCTTCTATTAATCTCTAACGACATTTCGGGCCCCATCCCTCCTGAGATTGGTAACTGCA GTTCTCTCATTCGACTTCGGCTTGTGAACAACAGAATCAGTGGACAGATACCAAGAGAAATTGGGTCTCTCATTAACCTCATTTTCCTTGATCTGTCCGA AAATCATCTTACTGGATCAGTACCACCTGAGATTGGAAATTGCAAAGAACTTCAAATGCTGAATCTAAGCAATAACTCCCTTTCTGGAACCTTTCCTAGT GGTTTGTCTTCTGTCACAAGGCTTGAGGTCTTGGATGTTTCTATTAATCGGCTTTCGGGTGAGGTTCCAACGAATATCGGTGAACTCACTTCACTTCTTA GGCTCATCCTAAGCAAAAATTCTTTCTCAGGATCCATTCCATCATCACTTGGGCAATGTTCAAGTCTTCAATTGCTAGACCTTAGTAGCAACATGTTCTC AGGGAGCATCCCACCAGAACTGTTTCAAATCGAAGCACTTGACATTGCTCTAAACTTGAGTGACAATGCATTATCTGGATCAATCCCACCAGAGATTTCA GCTTTGAACAAGCTCTCTATTCTAGACCTTTCACACAACAAACTCGAAGGTGACTTGATGGCATTTTCCGCGCTCGAAAATCTTGTTTCTCTTAACATTT CCTACAACAATTTCAGTGGTTATCTACCAGACAACAACTTGTTCCACCAATTATCACAAACAGATTTGGAAAGAAATCAAGGTTTGTGTCCTAAGGGTCA CGATTCCTGTTTCATTAGCTATGCTGCAAAAACAAAAAAGCGAAATAGTACTAGTTCTAAGAGGTCAGAGATGATCAACCTGGCCATTGGATTGCTCAGT GCCTTGACTGTTGCAATGGCAATATTCGGAGTTCTCGCAGTCATTCGAGCAAGAAAAATGGTTCGAGATGACAATGATTCTGAGATGGGAGAGGATTCAG CATGGCCATGGCAGTTCACTCCATTCCAAAAGGTAAATTTCTCAGTGGAACAAGTTTTGAAATGTTTGGTGGAATCCAATGTAATTGGGAAAGGGTGTTC GGGGATAGTATATCGCGCAGAAATGGAAAATGGGGATGTCATTGCTGTGAAAAAACTATGGCCAACAACATTGGCTGCTAGATATGATTGTCAAAATTAC AAGCTAGCAGTTAATGAAGGAGTTCGCGATTCGTTTTCAGCCGAGGTAAAAACTCTCGGTTCGATTCGCCACAAGAACATTGTCAGGTTCTTAGGCTGCT GTTGGAACAAAAACACAAGATTGCTTATGTATGACTACATGTCAAATGGGAGTCTAGGAGGCCTACTTCATGAAAGAGCTGGAAACTGCTTAGAATGGGA CATCCGATTTCGGATAATACTAGGAGCAGCTCAAGGATTGGCTTATTTACACCATGATTGTGCCCCTCCCATTGTTCACAGAGACATTAAGGCCAATAAC ATCCTTATTGGCCCTGAATTTGAACCATACATTGCTGATTTTGGTCTTGCCAAACTTGTTGATGATGGAGATTTTGCAAGATCTTCTAGTACACTAGCTG GTTCCTATGGTTACATAGCTCCTGAATATGGTTATATGATGAAGATAACAGAAAAAAGTGATGTATACAGCTATGGTATTGTTGTATTAGAAGTACTAAC AGGAAAACAACCAATTGATCCAACAATACCAGAGGGACTACACATTGTTGATTGGGTAAGACATAAAAGAGGTGGAGTTGAAGTTCTTGATAAAAGCTTA CTCACTAGGCCAGAATCTGAAGTTGAAGAAATGTTACAAACCCTAGGTGTAGCTTTGTTGTGTGTGAATTCAAGAACAGATGATAGACCAACAATGAAAG ATGTGGTAGCAATGATGCAAGAAATTAAGCAAGAAAGAGAGGAATATATGAAAGGTGGCAACAACATGCTTCTTAATGGTTCTTCTGCAAATAATCAACA GCAAAATAATCATTCAAATGAAGAATCAATAAGCAGTACTAATATAACTATATAGTCTTTCAATGTTGATGTAACTTTGGATTAGTTATTAAAATAGGAA TGTGGCTAAGGTGCTAAGATTTCATTAGCAACAATGGTTTCTATCTTAGTGTATGTTGTTGTTAGTTCAGCTTCACAATTATGGGTTCTTTGTGTGTATA AGGATGAAGTCTAAATAATTGTTAGCATTGGAG
• Tissue: pods
• Gene name: LI_gene_139807;
• Additional information: details;

Expression of Ll_transcript_425879

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.8
• PS3: 0.7
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425879

• Blastp: LRR receptor-like serine/threonine-protein kinase RCH1 from Arabidopsis with 66.73% of identity
• Blastx: LRR receptor-like serine/threonine-protein kinase RCH1 from Arabidopsis with 69.2% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT5G48940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450204.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;